Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc32003g00002 ATGGCTTCCCTTCATCATCATCACACTGCTAGTGTTCCATATTCCAAAGCCAAACGCAACAACTCATCATCAACTGTTGTAGAGATTCATCATCATCGTGATGAGGTCATCACTACTACTACTACTAGTGCTGCTATGGCACAAATGGAAGCTTCAAGAAAGAGCAACAATAATGGAGAAGAGGAGAAGAGCAATCCTATCAGTTTGACATGGAAGGATCTTTGGGTGAGTGCTTCCATGGGGAAGAGAGGAACCAAAGCTATCCTTCAGGGGCTAACCGGCTACGCCAAACCGGGTCAGCTCTTGGCCATTATGGGTCCTTCTGGTTGTGGCAAGTCAACACTTCTCGATACATTAGCAGGTAGATTGGGTTCAAACACAAGACAAACAGGAGAGATTCTTGTCAATGGTCACAAACAGTCACTGGCTTATGGAAGCACGGCATATGTGACACAAGATGATACCTTGATGACATCGTTAACTGTGAGAGAAGCAGTGCACTACTCAGCCCAGCTTCAGTTACCTGATTCAATGTCAAAGGCAGAGAAGAAACAGAGAGCAGACTTCACAATAAGAGAGATGGGTTTGCAAGACGCCATTAACACTAGAATTGGTGGCTGGGGTTGCAAAGGGATCAGTGGTGGTCAGAAGAGGCGTGTCAGCATCTGCATTGAGATCCTAACACGCCCAAAGCTTTTGTTTCTTGATGAACCAACCAGTGGACTTGACAGTGCTGCCTCTTATTATGTCATGAAAACAATTAAATCTCAGCTGGATCATAAAGATGGGATTCAAAGGACTGTTATTGCTTCAATTCATCAGCCAAGTGCTGAAGTTTTCCAATTCTTTGATAATCTCTGTTTACTATCTACTGGCACTACAGTTTACTTTGGACCTGCTTCTTCTGCAATTCAGTTCTTTGCTTCAAATGGATTTCCTTGTCCCGCTCTACAAAATCCATCTGACCACTTACTGAAAACCATAAACAAGGACTTTGATCAGGAAATGATGGAGGTGGGTTTAGAGGGGACGAATGGAGGAGCATTACCTGCAGAAGCAGCAATTGGAATCCTTGTGAACTCATACAAATCCTCAGAAATGAACCAACAAGTTCAAAATGAAGTAGCTACCCTATCTAAAAAGGAAATTAGCTCATCAATAGAGAAGAAGAGTGGACATGCTAGCTTCCTGAGGCAGTGCATAGTTCTTACAAAAAGATCATTCGCGAACATGTCCCGTGACCTAGGCTATTATTGGCTACGCCTTGCTATATATATTGCCTTGGCTATAAGTTTAGCAACTGTCTTCTATCGTTTAGACACAACTTATGCTTCAATTAAGGATAGAGCATCACTTCTTGCATATATATCTACGTTCATAACATTCATGAGCATCGGTGGATTCCCATCTTTTGTGGAAGACATGAAGGTATTTGAAAGAGAAAGGCTAAATGGGCATTATGGTGTGACAGCATTTGTGATGGGAAACACGTTGTCAGCAATCCCATTTGTGCTGCTAGTTTCATTCATTCCAGGAGCTATAACATACTACCTCCCTGGTCTTCAGACAGGATACAATCACTTCCTTTACTTTATCTGTGTTCTGTTTTCATGCCTCATGTTAGTGGAGAGCCTCATGATGATAGTTGCAAGCTTGGTCCCAAACTACCTAATGGGAATCATAACCGGTGCTGGAATCCAAGGGATCATGATCTTAGTTGATGGCTTCTTCAAATTGCCAAGGACAATTCCCAAGCCATTGTGGAGATACCCTTTGCACTACGTAGCATTTCACACCTATGCGTTCCAAGGATTGTTCAGGAATGAATATGAAGGCTTGAAATTTGATGGAGGGTTAACACACAAGAAATACATAACGGGTGAAGAGATTCTGAGGGAGATGTGGCAAACAGACATGAGTTACTCAAAGTGGGTTGATCTTGCAATCTTGCTAGGGATGATTGTGGTGTATCGGGTTATGTTTTTGGTTATTATAAAGACTACGGAGAAAGTGAAACCCATTGTTGGATCCTTGAAGCTGCTGTTGTCGTCTCCCAACCGAACAATTCATGTCATCCAAAATCCCAATGCTACTCCTTTGCATCTCCAGCTCGTGTGA 2118 0.4263 MASLHHHHTASVPYSKAKRNNSSSTVVEIHHHRDEVITTTTTSAAMAQMEASRKSNNNGEEEKSNPISLTWKDLWVSASMGKRGTKAILQGLTGYAKPGQLLAIMGPSGCGKSTLLDTLAGRLGSNTRQTGEILVNGHKQSLAYGSTAYVTQDDTLMTSLTVREAVHYSAQLQLPDSMSKAEKKQRADFTIREMGLQDAINTRIGGWGCKGISGGQKRRVSICIEILTRPKLLFLDEPTSGLDSAASYYVMKTIKSQLDHKDGIQRTVIASIHQPSAEVFQFFDNLCLLSTGTTVYFGPASSAIQFFASNGFPCPALQNPSDHLLKTINKDFDQEMMEVGLEGTNGGALPAEAAIGILVNSYKSSEMNQQVQNEVATLSKKEISSSIEKKSGHASFLRQCIVLTKRSFANMSRDLGYYWLRLAIYIALAISLATVFYRLDTTYASIKDRASLLAYISTFITFMSIGGFPSFVEDMKVFERERLNGHYGVTAFVMGNTLSAIPFVLLVSFIPGAITYYLPGLQTGYNHFLYFICVLFSCLMLVESLMMIVASLVPNYLMGIITGAGIQGIMILVDGFFKLPRTIPKPLWRYPLHYVAFHTYAFQGLFRNEYEGLKFDGGLTHKKYITGEEILREMWQTDMSYSKWVDLAILLGMIVVYRVMFLVIIKTTEKVKPIVGSLKLLLSSPNRTIHVIQNPNATPLHLQLV 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc32003g00002 705 ProSitePatterns ABC transporters family signature. 212 226 IPR017871 GO:0005524|GO:0016887
Stsc32003g00002 705 MobiDBLite consensus disorder prediction 1 27 - -
Stsc32003g00002 705 Pfam ABC transporter 90 240 IPR003439 GO:0005524
Stsc32003g00002 705 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 51 677 - -
Stsc32003g00002 705 SMART AAA_5 98 293 IPR003593 GO:0016887
Stsc32003g00002 705 Pfam ABC-2 type transporter 398 610 IPR013525 GO:0016020|GO:0140359
Stsc32003g00002 705 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 70 307 IPR027417 -
Stsc32003g00002 705 Gene3D - 69 308 IPR027417 -
Stsc32003g00002 705 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 69 316 IPR003439 GO:0005524
Stsc32003g00002 705 FunFam ABC transporter G family member 11 67 361 - -
Stsc32003g00002 705 MobiDBLite consensus disorder prediction 43 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc32003g00002 Stsc-Chr32003 3720 6607 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc32003g00002 99 298 Calmodulin-binding Proteins AT2G36910 28.571 1.93e-09 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc32003g00002 K05681 - gmx:100794527 958.362