Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc31g00010 ATGGAGTTCACCTCTGGTTCGTTGGAAATCATCTCCGTTGAAGAGCCAACCGTGCCACCCGACTTTCGTTTCAGTGATTGCTTCTCCATCAACTTTACTTGCATCACAGAATTGATCCAAGTTACCCAACCCACAAATCCAACAACCTCTGATGATGATATTGACTTTTCATTTTCTTCAACTACATTCAATGAAGCCTTCTTTGTTCCCTCACGTATCCTATGTAACTGCACTCCACTCACAGACAACAATGGGGAAAACACTGAACTTTTACATGAAATCTTCTCTTCACTGCCCATATCCTCTGACTTATTGGACGAAATTTTACCTCACTTGGAGGAAAACGCAAGAACGATTCTAAGCCATGAACGGTGTGACTCGCTGGTGGAGATGGATGTGAACCTTCATGTTGTCACGTTCATTGCTGATGAAGATTTTCATGTCCATAATGATGATCACCGTCAAAATGTTTCTGAAGTAGGCGAACTCATGAATCTGTTGGAGAGACCCAAAGTTGACGAGGAAGAATATGGTGCTGAACAATGTGCTATTTGCTTGGAAGAATTTGGCCATGGCATTGAAGATTCAAGTGGAGAGATTGTTCGCACAAATTGCTCGCATGTTTTCCATGAACGCTGTATATTTCGTTGGCTCGAGCGTTGTATCAAATGTGAATCCCCCTATTCATGCCCATTATGCCGCTGCATCATATTTCCAACTTCACAGAAAGATGATTAG 738 0.4228 MEFTSGSLEIISVEEPTVPPDFRFSDCFSINFTCITELIQVTQPTNPTTSDDDIDFSFSSTTFNEAFFVPSRILCNCTPLTDNNGENTELLHEIFSSLPISSDLLDEILPHLEENARTILSHERCDSLVEMDVNLHVVTFIADEDFHVHNDDHRQNVSEVGELMNLLERPKVDEEEYGAEQCAICLEEFGHGIEDSSGEIVRTNCSHVFHERCIFRWLERCIKCESPYSCPLCRCIIFPTSQKDD 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc31g00010 245 CDD RING-H2 182 234 - -
Stsc31g00010 245 ProSiteProfiles Zinc finger RING-type profile. 182 234 IPR001841 -
Stsc31g00010 245 PANTHER RING ZINC FINGER PROTEIN-RELATED 135 242 - -
Stsc31g00010 245 SMART ring_2 182 233 IPR001841 -
Stsc31g00010 245 SUPERFAMILY RING/U-box 170 239 - -
Stsc31g00010 245 Pfam Ring finger domain 181 234 IPR001841 -
Stsc31g00010 245 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 143 238 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc31g00010 Stsc-Chr31 126517 127254 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc31g00010 164 234 C3H Transcription Factor Family AT4G12190 40.541 1.89e-08 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc31g00010 - - adu:110273516 314.694