Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc31g00009 | ATGGCGCACACCTCTTATTCGTTGGAAATCGCTTCCCGTGAAAACCCAACCGCCCCACCAGAATGTTGTTTCAGTGATTGTTTTTCCATCAATCTCACTTTTACCATAGAGTTTATCCAAGTTGATATTGACCTTTCTTCTTCAACTACATTCAGGGAAGCATTCTTGGTTCCTTGGGATATCCTATGTAACTGTACTCCACTCACAGATTTCAATGGCCAGAACGCCGAAATTTTACATGACATCTTCTCTTCAGTGCACATATCCTATGAGTTATTGGACGAAATTTTACCTCACTTGGCTGAAAGCGCAAGAACGATTCTAAGTGGTGAACGGTGTGGCTCGTTGGAGATGGATGTGAACCTTCATGTTGTTATGCACATTGCTGATGAAGATTTCGAGATCTTTAATGATGATGAACACCGTGAAAATGTTTCTGAAGTAGGCCAAGTTGTGACTCTAATGGAGAGACTCAAAGTTGATGTGGAAGAAGATGGTGATGAACAATGCGCTATTTGCTTGGAAGAGTTATTTGGAGATGGTAATGAAGATTCAAGTGGAGAAGTTGTTGTTCGCACAAATTGCTCGCATGTTTTCCATGAACGCTGTATATTGCGTTGGATCGAGCGTTGTATCAAATGTGAATCGCCCTATTCTTGTCCATTGTGCCGCTGCAACATGATTCCAAATTCAGAGGGAGATGATGAATAA | 711 | 0.4149 | MAHTSYSLEIASRENPTAPPECCFSDCFSINLTFTIEFIQVDIDLSSSTTFREAFLVPWDILCNCTPLTDFNGQNAEILHDIFSSVHISYELLDEILPHLAESARTILSGERCGSLEMDVNLHVVMHIADEDFEIFNDDEHRENVSEVGQVVTLMERLKVDVEEDGDEQCAICLEELFGDGNEDSSGEVVVRTNCSHVFHERCILRWIERCIKCESPYSCPLCRCNMIPNSEGDDE | 236 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc31g00009 | 236 | ProSiteProfiles | Zinc finger RING-type profile. | 170 | 224 | IPR001841 | - | |
Stsc31g00009 | 236 | PANTHER | RING ZINC FINGER PROTEIN-RELATED | 150 | 231 | - | - | |
Stsc31g00009 | 236 | SUPERFAMILY | RING/U-box | 156 | 229 | - | - | |
Stsc31g00009 | 236 | CDD | RING-H2 | 170 | 224 | - | - | |
Stsc31g00009 | 236 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 133 | 230 | IPR013083 | - | |
Stsc31g00009 | 236 | SMART | ring_2 | 170 | 223 | IPR001841 | - | |
Stsc31g00009 | 236 | Pfam | Ring finger domain | 169 | 224 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc31g00009 | Stsc-Chr31 | 124251 | 124961 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc31g00009 | 168 | 230 | C3H Transcription Factor Family | AT4G00305 | 38.095 | 3.38e-07 | 46.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc31g00009 | - | - | adu:110273516 | 256.529 |