Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc31g00007 ATGGAAATTTCAGAACTCCACCTCCCACTTAACCCATCAAACCCTAACGATCCCCAAGAAACCAAACCCACCGCCCCCACCGCCACAATCACCACTCCTTCTCAAACACCTAACAACAGCAGCAGCAGCAGTGATAATAATAACAATAACAGTAATAGCAGTAACTGCACTGCTGAGAAAACCATTAATAACCGCAAGTGCAAAGGAAAAGGTGGACCCGACAACAACAAGTTTCGTTACCGCGGAGTCAGGCAGCGGAGTTGGGGGAAATGGGTGGCGGAGATAAGAGAACCGCGCAAGAGGACAAGGAAGTGGCTCGGAACATTCGCTACCGCCGAAGATGCCGCCAGGGCCTACGACCGTGCCGCCTTGATCCTCTACGGTTCTAGGGCGCAGTTGAATCTGCAACCTTCAATTTCCGTCAATTCTAACTCTTCTACTTCCTCTTCTCGTGGCGGTTCTTCTTCTTCCTCTTCTTCCACCACACAAAATCTTAGGCCTTTGCTTCCTCGCCCTTCCGGGTTCACCTTCTCTTCCGGTTCCCGGTTCCCGGTGGTGTTTAACGGCCTCAACAATAATAATAACAACTTCACTGCTGCTGCTGCAGCAGCCTCGGGTTTTGTGCCTTTTGGGGTTTACCCTTTGAGTAACGGTAACAATAACATTGTTGCACCTACACCGGTGCAGTTTCATCATCAGTATTCACCACAAGCGTTGCAAATTCAGCAGCAGCAGCAGCAACAACAGTCTCATCATCGTCGTCAAAAAGTTGATGAATCAGGTGGAACAAGTTCAATTAGGTTAGCCTCGCCGCATCAGAATAATAATAATACTGATACTAATGATAATAATCATCATCATCATGTTCCGGGTAATGTTCATAATCATCACCAGCAAGATAATTGCATGGTTATGGAAGAAATATTTAAAGATGATAATCCCTTGGTGGCTTCATCAACCTTGTCTAACTCAGAGGTTGGGATAGATGCAGTGGCGGATCCGGATCCAGAAGCGGGTATCGGATCTATGTGGTCTTCGTTGACGAATGAGGAGGAGTATCCAGTTAGCTTATGGGATTACAATTACAATGATCCATACTTTTGTTTGAGTTTTGAAGAAATTTGA 1125 0.4622 MEISELHLPLNPSNPNDPQETKPTAPTATITTPSQTPNNSSSSSDNNNNNSNSSNCTAEKTINNRKCKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFATAEDAARAYDRAALILYGSRAQLNLQPSISVNSNSSTSSSRGGSSSSSSSTTQNLRPLLPRPSGFTFSSGSRFPVVFNGLNNNNNNFTAAAAAASGFVPFGVYPLSNGNNNIVAPTPVQFHHQYSPQALQIQQQQQQQQSHHRRQKVDESGGTSSIRLASPHQNNNNTDTNDNNHHHHVPGNVHNHHQQDNCMVMEEIFKDDNPLVASSTLSNSEVGIDAVADPDPEAGIGSMWSSLTNEEEYPVSLWDYNYNDPYFCLSFEEI 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc31g00007 374 SUPERFAMILY DNA-binding domain 79 137 IPR016177 GO:0003677
Stsc31g00007 374 MobiDBLite consensus disorder prediction 1 81 - -
Stsc31g00007 374 MobiDBLite consensus disorder prediction 139 173 - -
Stsc31g00007 374 MobiDBLite consensus disorder prediction 9 62 - -
Stsc31g00007 374 MobiDBLite consensus disorder prediction 237 297 - -
Stsc31g00007 374 ProSiteProfiles AP2/ERF domain profile. 79 136 IPR001471 GO:0003700|GO:0006355
Stsc31g00007 374 Pfam AP2 domain 79 128 IPR001471 GO:0003700|GO:0006355
Stsc31g00007 374 PRINTS Ethylene responsive element binding protein signature 102 118 IPR001471 GO:0003700|GO:0006355
Stsc31g00007 374 PRINTS Ethylene responsive element binding protein signature 80 91 IPR001471 GO:0003700|GO:0006355
Stsc31g00007 374 MobiDBLite consensus disorder prediction 261 280 - -
Stsc31g00007 374 CDD AP2 79 136 IPR001471 GO:0003700|GO:0006355
Stsc31g00007 374 SMART rav1_2 79 142 IPR001471 GO:0003700|GO:0006355
Stsc31g00007 374 MobiDBLite consensus disorder prediction 63 81 - -
Stsc31g00007 374 Gene3D AP2/ERF domain 78 136 IPR036955 GO:0003700|GO:0006355
Stsc31g00007 374 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 45 335 - -
Stsc31g00007 374 FunFam Ethylene-responsive transcription factor 2 79 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc31g00007 Stsc-Chr31 97342 98466 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc31g00007 65 209 AP2-EREBP Transcription Factor Family AT2G40220 68.000 1.38e-40 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Stsc31g00007 AP2 8.3e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc31g00007 K09286 - gmx:100301892 221.476