Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc31g00006 ATGGCAGCTTCCGTACGAGTAAAAGAAGCCCTCGTTATTACTCCCTCCGAGCCCACGCCAGCCCGCGTCCTTTCTCTTTCAGCTCTTGACTCCCAACTCTTCCTTCGTTTCACCGTAGAGTACCTCTTGGTCTACCGGGCTTGGCACGGGCTTGACCAGGCTTCCACCACAGCACGTCTAAAACTGGCATTAGCTGAAGCACTCGTTCCCTATTATCCATTTGCAGGCAGGATCAGGCCCAGGCCAGACTCCCCGGGCCTTGAGGTGTTCCAACGACTTAGAGAAACCGCCGAAAACCGTTTCTCAGTGGAGAAAACTGTTGTTCCTCCACGTGGCAGACGTTCTAAGAGGATCGCCGCCGCTGGTCGTTCAGCTTACGTGGCTCCGAGACGGTGCAGCGGCGATCGCCGTCGGGATCATCACTGTATCTCCGATGGAATCGGAAGCGCAGAGTTTCTCAACTACTTTGCGGAGTTAGCTTCTAGAAAACGCGTCGCCGGTTCAATACCGAAACCTGTTTGGGACCGTCACCTCCTGAATCCCCCGCCACCAGCGGCGAAGAAAATCGCCCGGGTCAACCCGGCGAGTCACCCAGAGTTCAACCGAGTGCCTGATCTCTGTGACTTCATGAAGCTGGTCTCTACTGGACTCAAGCCTACCTCCATCACCTTCGATAAAATGCGGCTCGGTGAGTTGAAGAGGCTCGCCCGGTGCACGAGTCAAGCCGGCGATGAGTCATCGTCGTTCTACACGTCTTTCGAGGTTCTCGCAGCTCACGTGTGGAGGAGCTGGGCCAGAGCACTGGAATTTCCGCCAAATCAGGTGTTGAAGCTACTTTTCAGCATCAATGTACGGAACCGGGTCAAGCCGGGTTTACCAGAAGGTTACTACGGCAACGCATTCGTATTGGGATGCGCAGTGACGAAAGATGGGGAGCTGGAGGAGAAAGGAATCGGGTACGGATCGGGTTTGGTGAGAAGGGCGAAGGGAAGAGTGGGGAAGGAGTACGTGAGGGAGGTGAGTGAGTTAGTGAGCGAGTCAATGGCAAATCCAGACTTAGTGGGAGTGCTAATAGTGTCGCAGTGGTCGCGGTTGGGAATGGAGATGGTGGATTTCGGAATGGGGAAGCCGGTGCACGTGGGATCGGTGTGCTGCGACAGATACTGTTTGTTTTTGCCGGCGAGTGATGAAGATGATGAGAGTGTGAAGGTGATGATGGCGGTGCCTACTTTCGCTGTTGACAGTTACCACTTCTTGATGCAAGATTCCAATCTTTTGTAA 1281 0.5441 MAASVRVKEALVITPSEPTPARVLSLSALDSQLFLRFTVEYLLVYRAWHGLDQASTTARLKLALAEALVPYYPFAGRIRPRPDSPGLEVFQRLRETAENRFSVEKTVVPPRGRRSKRIAAAGRSAYVAPRRCSGDRRRDHHCISDGIGSAEFLNYFAELASRKRVAGSIPKPVWDRHLLNPPPPAAKKIARVNPASHPEFNRVPDLCDFMKLVSTGLKPTSITFDKMRLGELKRLARCTSQAGDESSSFYTSFEVLAAHVWRSWARALEFPPNQVLKLLFSINVRNRVKPGLPEGYYGNAFVLGCAVTKDGELEEKGIGYGSGLVRRAKGRVGKEYVREVSELVSESMANPDLVGVLIVSQWSRLGMEMVDFGMGKPVHVGSVCCDRYCLFLPASDEDDESVKVMMAVPTFAVDSYHFLMQDSNLL 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc31g00006 426 Gene3D - 1 105 IPR023213 -
Stsc31g00006 426 PANTHER ACYL TRANSFERASE 4 3 85 - -
Stsc31g00006 426 Gene3D - 138 200 IPR023213 -
Stsc31g00006 426 Pfam Transferase family 4 88 - -
Stsc31g00006 426 Pfam Transferase family 141 410 - -
Stsc31g00006 426 Gene3D - 214 416 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc31g00006 Stsc-Chr31 71092 72829 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc31g00006 5 408 Monolignol Biosynthesis Gene Families AT5G48930 26.316 6.38e-29 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc31g00006 - - gmx:100817048 523.472