Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc31g00005 ATGTTGAATATAGTATCAAACTCTTTTATTTCTAAGAATTTTGTCCATTACCATGTTAATGATGAGAAGTTTAAAGTGTTTAAGGATATAGCTTTTGGCTTGACTGAAGAATCTTCAAGGTCTTGTTTGGGAGATTTTTTTCCTTTGTTAGGATCTTTTGGTGCACATGGTGCACGTAAAAGGACAAAAGATCGTTATGCAAAGTTGTATGCAGTTTTTGATGGTGCCATAGAAGAGAGAATTCGATCGAGGGATTCAAAAACATATTCTAGTGATTGCAATGATGTGTTGGATTCCCTTTTGGATCTTGTCAATGACGAGAGTTCTGAATTCAATCGCCATGATGTTTTGCATTTATTGATTGATTTATTTATTGCTGCAATAGACACAACATCAAGCACATTAGAATGGGCAATGGCAGAGTTGATACATAGTCCAACAACATTGCATAAACTTAAAGAAGAACTTCAACAATCACTTGGCAAAAATGGAGAAGTTGAAGAATCTCACATCTCAAAACTTCCATACCTTAATGCAGTTGTGAAAGAAACTTTGAGGCTTCATCCACCAGGACCAATGCTCATTCCCCACAAAGCAAATGATGATGTGGAGCTAGGTGGTTTCACTGTGCCCAAAAATGCACAAGTCTTAATTAATGTGTGGTCAATGGGAAGAAACTCAAACATTTGGGCTAATCCTAATTCATTTAAACCCGAGAGGTTCTTGAATAGTGAAATTGATTTTAAGGGTCAACATTTTGAGTTTATTCCATTTGGGTCTGGAAGAAGAATTTGCCCTGGATTACCAATGGCTACAAGGAGTTTGAGTTTTATGTTGGCATCACTTTTGTATCAATTCAATTGGAAGGTTGCTAATGGGACGAATCCAGAAGATATAGATATGAGTTTCAGTTATGGCCTTACCATGCATAAGGCAGAGCCTTTACTTCTTATACCTATCAAAATTTAG 969 0.3633 MLNIVSNSFISKNFVHYHVNDEKFKVFKDIAFGLTEESSRSCLGDFFPLLGSFGAHGARKRTKDRYAKLYAVFDGAIEERIRSRDSKTYSSDCNDVLDSLLDLVNDESSEFNRHDVLHLLIDLFIAAIDTTSSTLEWAMAELIHSPTTLHKLKEELQQSLGKNGEVEESHISKLPYLNAVVKETLRLHPPGPMLIPHKANDDVELGGFTVPKNAQVLINVWSMGRNSNIWANPNSFKPERFLNSEIDFKGQHFEFIPFGSGRRICPGLPMATRSLSFMLASLLYQFNWKVANGTNPEDIDMSFSYGLTMHKAEPLLLIPIKI 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc31g00005 322 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 321 - -
Stsc31g00005 322 Coils Coil 149 169 - -
Stsc31g00005 322 PRINTS P450 superfamily signature 179 190 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31g00005 322 PRINTS P450 superfamily signature 265 276 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31g00005 322 PRINTS P450 superfamily signature 126 143 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31g00005 322 PRINTS P450 superfamily signature 256 265 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31g00005 322 FunFam Geraniol 8-hydroxylase 66 318 - -
Stsc31g00005 322 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 258 267 IPR017972 GO:0005506|GO:0016705
Stsc31g00005 322 Pfam Cytochrome P450 18 312 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31g00005 322 Gene3D Cytochrome P450 1 316 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31g00005 322 PRINTS E-class P450 group I signature 219 243 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31g00005 322 PRINTS E-class P450 group I signature 255 265 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31g00005 322 PRINTS E-class P450 group I signature 115 132 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31g00005 322 PRINTS E-class P450 group I signature 135 161 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31g00005 322 PRINTS E-class P450 group I signature 265 288 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31g00005 322 PRINTS E-class P450 group I signature 178 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31g00005 322 SUPERFAMILY Cytochrome P450 3 319 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc31g00005 Stsc-Chr31 38892 40353 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc31g00005 2 321 Cytochrome P450 AT2G45570 48.297 2.88e-109 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc31g00005 - - gmx:100809483 369.007