Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc31991g00002 ATGGCTTCCGAAGCTTCCAGAAACATTGATCTCACGCTAGGAGAGCCCAAGGGGCCCAAGGAGGAGCTCGACACGGAGGAGCGCTCCCCGTCCCCGTCTCCGCCATCGGGCATACGCGTCATGCCGGTGGCAGTGCACATGCCATCAGGGATGTCCATGTCCATGAACAAGGCCCTAGTCCAAGCCCAATCCCAGGCCCAGGCCCAACCGAATCAAAAGAGAGCCTCCACGAAGGACAGGCACACCAAGGTGGAGGGACGCGGCAGGAGAATCCGAATGCCTGCCACGTGTGCGGCCCGGATCTTCCAGCTCACCCGGGAGCTCGGCCACAAGTCCGACGGAGAAACCATCCGGTGGCTTCTGGAGCACGCCGAGCCGGCTATCATCGCGGCCACCGGAACCGGCACGGTCCCCGCCATCGCCATGTCCGTTAACGGAACACTTAAGATCCCAACCACGAAACCGCTTTCAGGATCCGACCCGGAACCGGGAGACTCGCCCTGCAAGAAGAAGCGCAAAAGACCCGCCAACAGTGCCTACGTGGACATAAACGAAAGTGCTGCTTCAGTCTCCGCAGGCTTGACAGTTACAACAAATTCCCAAACCGCTATTGCCTTACCGCAAAACGCGGTACCTGCCATGTGGACGGCGATTCCGTCAAACGCTTTCTTCGTCGTGCCTTCCGTTGCGGCGGCGGGGCCTTCCAACGCGCCGCAATTCTTCACATTCGCGCGTCCGATTTCAGCGTTTGTTTCGTCCGTGATGGCGCCGGTTCAAATTCAACCGGTCGGTTCGACTGCTCCGTCGTCGAAATCGCCGCCAAGAGCGACGGTTATGGCGCCGAGCAGTGCAACTACGACAACTCAGACGCTGAGGGATTTTTCACTGGAGATTTACGATAAACAAGAGCTTCAGTTCATGTCGAAGTCGAGTTCAAAACATTGA 945 0.5841 MASEASRNIDLTLGEPKGPKEELDTEERSPSPSPPSGIRVMPVAVHMPSGMSMSMNKALVQAQSQAQAQPNQKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIAATGTGTVPAIAMSVNGTLKIPTTKPLSGSDPEPGDSPCKKKRKRPANSAYVDINESAASVSAGLTVTTNSQTAIALPQNAVPAMWTAIPSNAFFVVPSVAAAGPSNAPQFFTFARPISAFVSSVMAPVQIQPVGSTAPSSKSPPRATVMAPSSATTTTQTLRDFSLEIYDKQELQFMSKSSSKH 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc31991g00002 314 MobiDBLite consensus disorder prediction 263 287 - -
Stsc31991g00002 314 MobiDBLite consensus disorder prediction 59 73 - -
Stsc31991g00002 314 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 37 248 IPR005333 GO:0003700
Stsc31991g00002 314 ProSiteProfiles TCP domain profile. 77 131 IPR017887 -
Stsc31991g00002 314 MobiDBLite consensus disorder prediction 14 28 - -
Stsc31991g00002 314 MobiDBLite consensus disorder prediction 151 177 - -
Stsc31991g00002 314 MobiDBLite consensus disorder prediction 1 41 - -
Stsc31991g00002 314 Pfam TCP family transcription factor 76 157 IPR017887 -
Stsc31991g00002 314 MobiDBLite consensus disorder prediction 59 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc31991g00002 Stsc-Chr31991 4842 5867 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc31991g00002 70 313 TCP Transcription Factor Family AT2G45680 56.655 1.29e-79 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Stsc31991g00002 TCP 3e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc31991g00002 - - aip:107626029 446.432