Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc31942g00001 ATGGACCATGCCAATATTGCTTATGATTTGGTCATGGTGGCTCTATCCATATCCCTTATAGTTCTTGGTGTTGTTCTGTATCTTGCTTGCAAGAAAAAACCGGTTGAATCCGAGGAAACACTTCCGGTAAAATTCTGTGCTCGTGCATACCCTTTAATGGAGCTTGATGCTGCCACTGATGGCTTCAACCATAGGAGAATTGTTGGCCAAGGTCGCCTAGGAACGGTCTATGCCACGACGCTGTCGAATGCAGAGCTTGTAGCTGTGAAGAGGATCCATCCTTTTCTTGTTTTGAGCAATGCAGGCTTTGGATTCTCATCAGTGTTGAAGTGGCTCTCATTGGCACAACATCCCAACGTTGTTCCAATCATAGGGTTCTCCGAGGCACCGGGTGAAAGAGCTGTAGTCATGGAGTTTGTCCGAATGGCGAGCTTGGAATTCTATTTACAACAAAACCAAGATGGTGTTTCACTTCTTGATTGGAGCCAGAGGTTTAGAATTGCAGCAGGTGTAGCTAGAGGGCTTCAATACCTGCATGAAGTGGTAGCACCAAACATAGTACATGGTTGTGTTAAGTCCTCTAATGTTCTTATTGATGTGAATTTCTGTGCTAGAGTTTCTGATTATGGACTTAACTTTTTGGCACCAAGGGAGAAGAGAGGGGTAGTGGGGTATGTGGATGGTGAATATTGGAATGAGAGAGGGGGTGGTGCTACAAAAGAGAGTGATGTTTATGGCTTAGGTGTGGTGCTTTTGGAGCTTCTAAGTGGAAGAGGGTGTGAGGGAGGGTCATTAGCAAATTGGGCATTGCCTTTGATTAAGGAAATGAGGTTTGGTGAAGTTTTGGATCATAGGCTTGTGATTCCTTCTGATATTAGTCCTCTGGTTAGATTGGCCAAAGTTGCTTCAGCTTGTGTTGGTAATCCAAGGAAGTGTAGGCCTAGTGTGGCTCAA 954 0.4486 MDHANIAYDLVMVALSISLIVLGVVLYLACKKKPVESEETLPVKFCARAYPLMELDAATDGFNHRRIVGQGRLGTVYATTLSNAELVAVKRIHPFLVLSNAGFGFSSVLKWLSLAQHPNVVPIIGFSEAPGERAVVMEFVRMASLEFYLQQNQDGVSLLDWSQRFRIAAGVARGLQYLHEVVAPNIVHGCVKSSNVLIDVNFCARVSDYGLNFLAPREKRGVVGYVDGEYWNERGGGATKESDVYGLGVVLLELLSGRGCEGGSLANWALPLIKEMRFGEVLDHRLVIPSDISPLVRLAKVASACVGNPRKCRPSVAQ 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc31942g00001 318 FunFam serine/threonine-protein kinase-like protein ACR4 29 139 - -
Stsc31942g00001 318 FunFam Receptor protein kinase CRINKLY4 141 318 - -
Stsc31942g00001 318 Pfam Protein tyrosine and serine/threonine kinase 65 258 IPR001245 GO:0004672|GO:0006468
Stsc31942g00001 318 Gene3D Phosphorylase Kinase; domain 1 27 139 - -
Stsc31942g00001 318 ProSiteProfiles Protein kinase domain profile. 62 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc31942g00001 318 Gene3D Transferase(Phosphotransferase) domain 1 141 318 - -
Stsc31942g00001 318 SUPERFAMILY Protein kinase-like (PK-like) 38 317 IPR011009 -
Stsc31942g00001 318 PANTHER OS01G0253100 PROTEIN 47 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc31942g00001 Stsc-Chr31942 11351 12304 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc31942g00001 47 318 Receptor kinase-like Gene Family AT3G59420 38.811 2.54e-49 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Stsc31942g00001 PK_Tyr_Ser-Thr 1.1e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc31942g00001 - - vun:114187437 528.865