Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc31908g00001 ATGTTAACAAAACCATGGCATAAATTGTCCACATGGTTCCAAAGTAACATTTCCACACCATTTGAAACAGAACATGGGGCAAAGCTTTGGGAATATGCTTGTCATGAGCCTACACTTAATGAAATTTTCAACGATGGCATGGCAAGTGATGCTCAATTAGTTAGCGAGTTGTTACTTGATGACAAGTGCAAGGGTGTGTTTGAGGGTTTGAAATCGTTGGTTGATGTTGGTGGAGGCACTGGAACTCTTGCAAAGGCCATTGCCAAATCATTTCCAGGGTTAGAGTTCACTGTATTTGATCTCCCACATGTTGTTGCTGGCTTGGAAGGAAGTGACAACCTTAAATATATAGCAGGGGACATGTTTGAGGTCATTCCTTCGTCCGATGCCATTTTGTTGAAGTGGATTTTGCATGACTGGAACGACGAAGAATGTTTGAAGATATTGAAAAATTGCAAGGAAGCAATCATGAGTAAAGGCAAAGGAGGGAAGGTTATTATCATAGACATGGTAATAATGGAAGAAGAAAAGAAAAAATGCGATGATGATACATCTGTTGAAACACAACTCTTCTTTGACATGCTAATGATGGTGCTGTTAGCAGGAAAACAGAGAAATGAAAAAGAATGGGCCAAATTAATATTTTCTGCTGGTTTTAGTAACTATAAAATATCTCCAATTCTTGGATTAAGGTCTCTCATTGAGATATAA 711 0.384 MLTKPWHKLSTWFQSNISTPFETEHGAKLWEYACHEPTLNEIFNDGMASDAQLVSELLLDDKCKGVFEGLKSLVDVGGGTGTLAKAIAKSFPGLEFTVFDLPHVVAGLEGSDNLKYIAGDMFEVIPSSDAILLKWILHDWNDEECLKILKNCKEAIMSKGKGGKVIIIDMVIMEEEKKKCDDDTSVETQLFFDMLMMVLLAGKQRNEKEWAKLIFSAGFSNYKISPILGLRSLIEI 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc31908g00001 236 PANTHER O-METHYLTRANSFERASE 7 223 IPR016461 GO:0008168
Stsc31908g00001 236 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 3 235 IPR029063 -
Stsc31908g00001 236 Gene3D Vaccinia Virus protein VP39 1 236 IPR029063 -
Stsc31908g00001 236 Pfam O-methyltransferase domain 6 220 IPR001077 GO:0008171
Stsc31908g00001 236 CDD AdoMet_MTases 73 172 - -
Stsc31908g00001 236 FunFam O-methyltransferase ZRP4 1 236 - -
Stsc31908g00001 236 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 236 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc31908g00001 Stsc-Chr31908 1240 2700 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc31908g00001 20 224 Monolignol Biosynthesis Gene Families AT5G54160 38.350 3.29e-43 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc31908g00001 - K16040 aip:107609507 337.806