Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc318g00005 ATGGTGAATGCGATGGAATGGCAGAAGCAGCAACAGCAGAATCAGAATCAGCAGAGGAATTTGATCGTCGGAGAGATGAATTATGTGAAGGTGATGACCGATGAGCAGTTAGAGACTCTTAGGAAGCAGATCGCTGTTTATGCCACCATTTGTGAGAAGCTCATTGAGATGCACAAAACCCTCTCTGCTCAGCAAGACCTCGCTGGGGTCAGGCTTGGAAGCATGTATTGTGATCCATTGATGGCCTCTTCTGCCCACAAAATAACTTCGCGGCAGCGGTGGACTCCGACACCTGTGCAGCTTCAGATTCTTGAGAGGATGTTTGATCAGGGGACTGGAACTCCTAGCAAGGAGAAGATCAAGGAGATTACAGCTGAACTTAGTCAGCATGGTCAAATTTCTGAGACTAATGTCTACAACTGGTTTCAGAACCGACGCGCTAGATCAAAAAGAAAGCAGCAGAATGTGGCAGCTAGCAATAACACCAACGCCAACACTGAATCAGAGGTAGAGACTGAGGTTGATTCCAAGGATAAGCAGTCAAAACCAGAGGAGTTTCAGTCGCAGGAAAGCCTCGCTAATGTGGCTGCTCAGAATGTCCGCCTTCATAATCCTGACTTGCCTTACTTGAATCCGGAATCCAATAAATCAGATTCCATTTTCCCATCAGATGGCAGTCTAACATCTACAAGCAACTTTGGTCATATACCTGTTTTCAATGGGATTTTAGCAAATTCAAGGAGTGATTACCTTGCTGGAAAAATGGAAGAACCTGATAGTTACAACATATACCATGAAGAAGGAGACTACAACATTACAGGTTGA 825 0.4497 MVNAMEWQKQQQQNQNQQRNLIVGEMNYVKVMTDEQLETLRKQIAVYATICEKLIEMHKTLSAQQDLAGVRLGSMYCDPLMASSAHKITSRQRWTPTPVQLQILERMFDQGTGTPSKEKIKEITAELSQHGQISETNVYNWFQNRRARSKRKQQNVAASNNTNANTESEVETEVDSKDKQSKPEEFQSQESLANVAAQNVRLHNPDLPYLNPESNKSDSIFPSDGSLTSTSNFGHIPVFNGILANSRSDYLAGKMEEPDSYNIYHEEGDYNITG 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc318g00005 274 PANTHER WUSCHEL-RELATED HOMEOBOX 13 5 269 IPR044559 GO:0003700
Stsc318g00005 274 Gene3D - 93 158 - -
Stsc318g00005 274 MobiDBLite consensus disorder prediction 150 191 - -
Stsc318g00005 274 MobiDBLite consensus disorder prediction 170 185 - -
Stsc318g00005 274 SUPERFAMILY Homeodomain-like 89 155 IPR009057 -
Stsc318g00005 274 CDD homeodomain 91 153 IPR001356 GO:0003677
Stsc318g00005 274 SMART HOX_1 89 156 IPR001356 GO:0003677
Stsc318g00005 274 ProSiteProfiles 'Homeobox' domain profile. 87 152 IPR001356 GO:0003677
Stsc318g00005 274 FunFam WUSCHEL-related homeobox 11 91 158 - -
Stsc318g00005 274 Pfam Homeodomain 91 151 IPR001356 GO:0003677
Stsc318g00005 274 MobiDBLite consensus disorder prediction 153 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc318g00005 Stsc-Chr318 34693 37343 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc318g00005 5 274 Wox Gene Family AT4G35550 51.254 2.42e-86 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Stsc318g00005 Homeodomain 1.2e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc318g00005 - - gmx:100784355 369.007