Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc31887g00001 ATGGAAGAGCATCTAACTCCATTGGCAGTTACACATCTTCTTCAACACACTCTAAGAAGCTTGTGCATCCATGACAATTCTCAGTGGGTCTATGCTGTCTTCTGGAGGATCCTCCCCAGAAACTACCCTCCACCAAAGTGGGAGGGTCAAGGGGCTTATGATAGATCAAGAGGAAACAGAAGGAACTGGATACTGGTGTGGGAAGATGGATTCTGCAACTTTGCAGCATCAGCAGCAGCACCTGAAATAAACACTGGTGATTGTCCTAATAACAATAATAATAATAATAATAATGGTTCTTCATCTTCTTCATCTTCTGTTTATGGCAACTGTGAGTTCCAACCCTACCAAGGCCTGCAACCAGAGCTCTTCTTCAAGATGTCACATGAGATCTATAACTATGGTGAAGGATTGATAGGGAAAGTTGCTGCAGATCACAGTCACAAATGGATATACAAAGAGCCTAATGAACAAGAAATCAACTTCTTGTCAGCATGGCATAATTCAGCTGATTCACATCCTAGGACTTGGGAAGCACAGTTCCAATCTGGTATAAAGACCATAGCTCTAATTGCTGTAAGAGAAGGTGTTGTTCAATTGGGAGCAGTCCACAAGGTAATTGAGGATTTGAGCTATGTGGTTCTACTGAGGAAGAAATTCAGCTACATAGAAAGCATCCCAGGAGTTCTTCTACCACACCCTTCATCTTCAGCATACCCTTACAAAGTTGAAGGAGTGGTAGGTTATGGTGGCAATAATAACAACATTCTAGAACATCATCATCAATGGCATCATCATCATCATCATTTCCAAGGAACAATTATGCCACCACCAACACCAACAACTGAATTGTTCTATGACCATCATCATCATCATCATTTCAATAACAGCAACAACAGCAGCAGCATGGCATTGAAGATAACACCATCTATGAGTAGCCTTGAGGCACTTCTCTCTAAGCTACCTTCAGTTGTTCCACCACAATCACAATCACAAGAACAAAGGGCATTGGAATTCATGGGGGGGATTAATATTCAGCAGAAAGTTGTTGTAGCTGCAAAAGAGGAGGAGCTTGATAATAATGATGATGATGAAGTTTATAGGCCTGAGCTTGATATTGGTGAGAGCAGTACTTCCATGCATCATCATCATCACAACTATCATCATCATAATAATAATAATCAACACCATCATTTCCATCATCATCATAATAACAATAATAATAATAATGTAACTAGTAGTGGACCCAATAATAATAATGGATTCTGA 1269 0.4003 MEEHLTPLAVTHLLQHTLRSLCIHDNSQWVYAVFWRILPRNYPPPKWEGQGAYDRSRGNRRNWILVWEDGFCNFAASAAAPEINTGDCPNNNNNNNNNGSSSSSSSVYGNCEFQPYQGLQPELFFKMSHEIYNYGEGLIGKVAADHSHKWIYKEPNEQEINFLSAWHNSADSHPRTWEAQFQSGIKTIALIAVREGVVQLGAVHKVIEDLSYVVLLRKKFSYIESIPGVLLPHPSSSAYPYKVEGVVGYGGNNNNILEHHHQWHHHHHHFQGTIMPPPTPTTELFYDHHHHHHFNNSNNSSSMALKITPSMSSLEALLSKLPSVVPPQSQSQEQRALEFMGGINIQQKVVVAAKEEELDNNDDDEVYRPELDIGESSTSMHHHHHNYHHHNNNNQHHHFHHHHNNNNNNNVTSSGPNNNNGF 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc31887g00001 422 MobiDBLite consensus disorder prediction 382 404 - -
Stsc31887g00001 422 MobiDBLite consensus disorder prediction 376 422 - -
Stsc31887g00001 422 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 14 220 IPR025610 -
Stsc31887g00001 422 PANTHER TRANSCRIPTION FACTOR MYC/MYB-RELATED 1 408 - -
Stsc31887g00001 422 MobiDBLite consensus disorder prediction 405 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc31887g00001 Stsc-Chr31887 967 3326 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc31887g00001 126 220 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 41.667 1.50e-13 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc31887g00001 - - ahf:112750044 589.341