Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc31874g00002 ATGTACATGAGCTCACCGTCGGGACCCAGCTCCATTCCCGTCACCACCACCACTCACCGGCAACACATCAGCACCCATCGAAATAGGCTCCACCGCCTTCAGAATCTTCCACTCCTCCGGCTAGCACTCACCACAACTACCGTCGCGATCTCCGCTCACCACAATTTCGAGTCGCCGCCGCTTCTTCAGCATCAACGTCCGTCTTTTCCTCTTCTTCTTCGTGCGATCTCGGCTGCCGCCGCCATTTCTTTGTCCTCTTCGACCGCTTCATTGATTATCCTGCTACTAAGTAGTAGTGCACAAACAAGCTCTGCTCAACTTTCTCGTGGCTTCTACAACAGTACATGCCCCAATGTGGAACAGCTGGTTCGCGCCGCCGTTACGCAGAAGTTGCAGCAGACATTTGTGACGGCCCCTGCCACTCTCCGCCTCTTCTTCCATGATTGTTTTGTCAGGGGTTGTGATGCTTCAGTTCTGCTTGTGTCTCCAGCTAACCAGGCAGAGAGGAACCACCCGGACGATGTGTCGCTAGCCGGGGACGGTTTCGACACGGTGGTTAAGGCTAAGGCAGCCGTTGATAGTGATCCTCAGTGCAGAAACAAAGTCTCTTGTGCTGATATTCTTGCTTTGGCTACTAGAGATGTTGTCAACTTGGTCGGGGGACCATTTTATGAAGTTGAATTGGGAAGGCGTGATGGAAGAATATCTACTATTGCAAGTGTTCAACACCGTCTTCCTGGCCCTGATTTCAATTTGGATCAGCTCAATTCTTTGTTTATCTCTAATGGCCTCTCTCAAACAGATATGATTGCATTATCAGGTGGACATACAATTGGATTCTCTCACTGCAACAAATTCTCAAAAAGAATTGGAAACAGAATTGATCCCACAATGAATTTGCAATATGCCTTGAAACTGAAACAAACATGCCCTGTGAATGTTGATCCAAGAGTAGCCTTAGCTTTGGACCCTTTCACACCTCAGACATTTGATAACCAATACTTCAAGAACTTGCAACAAGGAATGGGACTCTTGTCTTCTGATCAAGTGCTTTTCATTGATCCAAGGTCAAGGGACACTGTCAACTTGTTTGCATCAAATGAACAAGCATTTCATGATGCTTTTGTCACTGCTATTACCAAATTGGGCAGGGTGGGTGTTAAGACTGGACATCAGGGTGAAATTAGGGTTGATTGCAGCAAAGTCAATTAG 1212 0.4736 MYMSSPSGPSSIPVTTTTHRQHISTHRNRLHRLQNLPLLRLALTTTTVAISAHHNFESPPLLQHQRPSFPLLLRAISAAAAISLSSSTASLIILLLSSSAQTSSAQLSRGFYNSTCPNVEQLVRAAVTQKLQQTFVTAPATLRLFFHDCFVRGCDASVLLVSPANQAERNHPDDVSLAGDGFDTVVKAKAAVDSDPQCRNKVSCADILALATRDVVNLVGGPFYEVELGRRDGRISTIASVQHRLPGPDFNLDQLNSLFISNGLSQTDMIALSGGHTIGFSHCNKFSKRIGNRIDPTMNLQYALKLKQTCPVNVDPRVALALDPFTPQTFDNQYFKNLQQGMGLLSSDQVLFIDPRSRDTVNLFASNEQAFHDAFVTAITKLGRVGVKTGHQGEIRVDCSKVN 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc31874g00002 403 PRINTS Haem peroxidase superfamily signature 323 338 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc31874g00002 403 PRINTS Haem peroxidase superfamily signature 138 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc31874g00002 403 PRINTS Haem peroxidase superfamily signature 268 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc31874g00002 403 PRINTS Haem peroxidase superfamily signature 202 219 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc31874g00002 403 PRINTS Haem peroxidase superfamily signature 220 232 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc31874g00002 403 CDD secretory_peroxidase 107 402 IPR033905 GO:0004601|GO:0042744
Stsc31874g00002 403 Gene3D Peroxidase, domain 2 246 382 - -
Stsc31874g00002 403 PANTHER - 91 403 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc31874g00002 403 MobiDBLite consensus disorder prediction 1 22 - -
Stsc31874g00002 403 ProSitePatterns Peroxidases proximal heme-ligand signature. 268 278 IPR019793 -
Stsc31874g00002 403 ProSitePatterns Peroxidases active site signature. 138 149 IPR019794 GO:0004601
Stsc31874g00002 403 PRINTS Plant peroxidase signature 267 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc31874g00002 403 PRINTS Plant peroxidase signature 220 235 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc31874g00002 403 PRINTS Plant peroxidase signature 321 336 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc31874g00002 403 PRINTS Plant peroxidase signature 140 160 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc31874g00002 403 PRINTS Plant peroxidase signature 337 354 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc31874g00002 403 PRINTS Plant peroxidase signature 201 211 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc31874g00002 403 PRINTS Plant peroxidase signature 180 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc31874g00002 403 PRINTS Plant peroxidase signature 116 135 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc31874g00002 403 PRINTS Plant peroxidase signature 377 390 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc31874g00002 403 MobiDBLite consensus disorder prediction 1 21 - -
Stsc31874g00002 403 FunFam Peroxidase 246 382 - -
Stsc31874g00002 403 FunFam Peroxidase 110 254 - -
Stsc31874g00002 403 Gene3D - 110 403 - -
Stsc31874g00002 403 ProSiteProfiles Plant heme peroxidase family profile. 106 403 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc31874g00002 403 SUPERFAMILY Heme-dependent peroxidases 106 403 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc31874g00002 403 Pfam Peroxidase 124 367 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc31874g00002 Stsc-Chr31874 8179 12357 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc31874g00002 87 403 Peroxidase AT2G18980 69.565 8.83e-164 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc31874g00002 K00430 - gmx:100808542 498.819