Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc31847g00001 ATGGAGGGTGGTCATCATCATCATCATCATCAACAACAACAACATCAACATCTTCTTCAACAAATTCTTCTACCTCATCATCATCAACAACAACAACATAATACGATAATAAGCGTGGATGGTGGTGGTGGTGGTGGAATTAGTGATAGGTTTCCACAGTGGAGCATACAAGAGACTAAAGAGTTTCTAATGATCCGTGGTGAGCTTGATCAAACATTCATGGAGACAAAGAGGAACAAGCAATTGTGGGAAGTGATATCCAATAATATGAAGGAAAAGGGTTACCATAGAAGTGCAGAGCAGTGCAAGTGCAAGTGGAAAAACCTTGTTACCCGCTATAAGGGATGTGAAACAATGGAGCCAGAAGCATTGAGACAACAATTCCCATTCTACAATGAAATCCAAGCAATTTTCACATCAAGAAGCATGCAAAGAATGCTTTGGGCTGAAGCTGAAGGAACTTCAAAGAAGAACAAATCCATGCAACACCACCAACAACAACTCTCATCCGAAGAGGAAGAAGACGAGGACGATAATGGAAACAACAACAATGAAGAGAGTGAGGAACATCATCATCAAAAGGGTAGTAGTATTAACACCACAAGAAGAAAGAAGAAGAAAGCAAAGATAAGTGGCAAATACAACAACAATGGTGATTTCTTGAACAATTTGAAGGAGATTCTTGAGGAGTTCATGAGGCAACAGATGCAAATGGAGGCTCAATGGATGGAGGCGTTCGAGTCGAGGGAGAAGGAGAGGAGGATGAAGGAGATGGAGTGGAGGCAAACAATGGAGGCTTTGGAGAATGAGAGGATAATGATGGATCAAAGATGGAGGGAGAGGGAAGAACAATGGAGGCTTAGGGAAGAAGTTAGGGCTCAAAATAGAGATGAACTAATCACAACTCTCTTACACAAGCTTCAATAA 927 0.4132 MEGGHHHHHHQQQQHQHLLQQILLPHHHQQQQHNTIISVDGGGGGGISDRFPQWSIQETKEFLMIRGELDQTFMETKRNKQLWEVISNNMKEKGYHRSAEQCKCKWKNLVTRYKGCETMEPEALRQQFPFYNEIQAIFTSRSMQRMLWAEAEGTSKKNKSMQHHQQQLSSEEEEDEDDNGNNNNEESEEHHHQKGSSINTTRRKKKKAKISGKYNNNGDFLNNLKEILEEFMRQQMQMEAQWMEAFESREKERRMKEMEWRQTMEALENERIMMDQRWREREEQWRLREEVRAQNRDELITTLLHKLQ 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc31847g00001 308 CDD GT1 52 117 - -
Stsc31847g00001 308 Pfam Myb/SANT-like DNA-binding domain 53 137 IPR044822 -
Stsc31847g00001 308 MobiDBLite consensus disorder prediction 197 211 - -
Stsc31847g00001 308 MobiDBLite consensus disorder prediction 153 216 - -
Stsc31847g00001 308 Coils Coil 221 241 - -
Stsc31847g00001 308 PANTHER FI21293P1 8 307 - -
Stsc31847g00001 308 Gene3D - 54 115 - -
Stsc31847g00001 308 ProSiteProfiles Myb-like domain profile. 54 110 IPR001005 -
Stsc31847g00001 308 FunFam Zinc finger and SCAN domain-containing 20 54 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc31847g00001 Stsc-Chr31847 1689 3480 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc31847g00001 34 307 Trihelix Transcription Factor Family AT5G01380 55.634 1.23e-70 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Stsc31847g00001 Myb_DNA-bind_4 2.8e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc31847g00001 - - tpra:123892994 325.865