Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc31827g00002 ATGGCCTATGGGCACCCCTCTCTTTTAGCCACGTTTGAAAAAGTGGCAAAAAGTGCCTACGGCCACACTTTTTTAAGGGTGGCAATTATTCCGAGTTGTCGCCATGCTTTTTTATTGCCACGTTTGAAGAACGTGGCGCCCTCCTCTTCTTCTCACTCACTGAAACCCTGCTTCTTCTCCAAAGGCTCTCATTCTCACAATCCCTCACTCGACGCTCCTTCACCCTCTCACAACCCTCACTCACCGGCGTTCCCTCATCTCTTGGCCGCTACTGTCTCCATCTATCACGGTAACAGTCACTCTTCGCCACCGCCTCTCTCTCTCTCACACGACAACCCTAACTCTTCTCACGATCGTTACTCACCGGTGCAGCCTCACCCTCTCACAATAGTTAGTCACCACCACTCCGCCAGTCACCACCTCTCTCTCTTAGTTGTTAAACGCTTCTCCATCTCTCTCTCTCGTGAGTTGCAACCTTCTGAACTCTATCGCCGGTCGCAATCCTCATCTCTTCGACCTGGACCTCACCTTCACTCAAGAAAGGGAGCGGTTCCTACCGTAGGAGCTGAAACAGAAACCATAGTTGAAATTAATATTGCAGATTTCATTGCTCTTCCTGGAAGAAGTGTTCAATGCCTTATAGATGGGAAACCTATTCTGGCAATATCTCCTCAACAGGTTGGTAATAGGAAGCTCATGGTGGAAAGTGGTACGGATATCTCAGACAAAGTGAAAAATATTTTGGTAGATTTAGAAGAAAGTACAAAGATACGGGTACTAGTAGCACATGATAATATAGTAATTAGAGTATTAGAGATTTCAAATCCACTGGAGAGAGAATCATATGTTGTTATAAAACGGCTCATGCTTGCAAAGAAGGGAAATGATAGGATTTTTTATGGACTAATTATAGAAATTTTTTTATATTGTTTTATTTTATTTTTTTCTTGTCACCAGCTAGTTTAG 966 0.4389 MAYGHPSLLATFEKVAKSAYGHTFLRVAIIPSCRHAFLLPRLKNVAPSSSSHSLKPCFFSKGSHSHNPSLDAPSPSHNPHSPAFPHLLAATVSIYHGNSHSSPPPLSLSHDNPNSSHDRYSPVQPHPLTIVSHHHSASHHLSLLVVKRFSISLSRELQPSELYRRSQSSSLRPGPHLHSRKGAVPTVGAETETIVEINIADFIALPGRSVQCLIDGKPILAISPQQVGNRKLMVESGTDISDKVKNILVDLEESTKIRVLVAHDNIVIRVLEISNPLERESYVVIKRLMLAKKGNDRIFYGLIIEIFLYCFILFFSCHQLV 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc31827g00002 321 MobiDBLite consensus disorder prediction 98 122 - -
Stsc31827g00002 321 Gene3D - 132 275 IPR023299 GO:0000166
Stsc31827g00002 321 MobiDBLite consensus disorder prediction 98 127 - -
Stsc31827g00002 321 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 193 289 - -
Stsc31827g00002 321 MobiDBLite consensus disorder prediction 162 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc31827g00002 Stsc-Chr31827 4603 7287 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc31827g00002 197 289 Primary Pumps ATPases AT5G44790 43.011 2.93e-17 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc31827g00002 K17686 - ini:109157129 97.0561