Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc31818g00003 ATGGGATCTTACAACGGATTGGTTTTCAACTCCATTGGATCTGAATTCTATACACGAGGAACCCCAATTGGAAGAGCAAATGGAGAATTCTGCTCATTTGTTTTGCACGTTCTGCTCAAATTTTATCAGGATTTGAATTCTATTGATGAGGTTGGGCAATTGGATGATCATTTTGAGGATCTGAATTCCATTGATAAGGTTGGGCAATTGGATAATCATTTTGAGGATTTGAATTCCATTAATAAGGTTCAGCAATTGGAAGATCAAACAGAGTTTCTGTTTAATGTTGATGAAGAGCATGTCCCCAAGGTTGGGATGACATTTAAGTCCACAGAAGCTAGTGAATTCTACAAGGAGTATGCTAAACGAGCTGGTTTTTCTTCCAAAATCAGAAATTCACAAAGAAATAAAGAGACAGGTGCAATCAAGAACCAACTCTTCACATGTAAGAGAGAGGGAAAAATAGATCTGACATCCCTGAGTCGGGAAAGACGAACCCCATGTCCCCGGCAAATTGTTCGGCAAGGATGTTCGTTCATATCGATAAGTTGA 552 0.3913 MGSYNGLVFNSIGSEFYTRGTPIGRANGEFCSFVLHVLLKFYQDLNSIDEVGQLDDHFEDLNSIDKVGQLDNHFEDLNSINKVQQLEDQTEFLFNVDEEHVPKVGMTFKSTEASEFYKEYAKRAGFSSKIRNSQRNKETGAIKNQLFTCKREGKIDLTSLSRERRTPCPRQIVRQGCSFISIS 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc31818g00003 183 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 58 177 - -
Stsc31818g00003 183 Pfam FAR1 DNA-binding domain 115 178 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc31818g00003 Stsc-Chr31818 9184 10329 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc31818g00003 FAR1 1.2e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc31818g00003 - K17604 aip:107636690 71.2478