Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc31808g00004 ATGGAATCTGCTACTCTTATGATGAGCTCTCTACCATTTTGGTATCTCATTCTCTTACTCGTTGGATTCATCACACCGTTTCTCAAATTCCTCAAACACCTAATACCTTCAAAATCCAGACGGACCAGATCACTCCCTCCAGGACCAAAACCATGGCCTATAATTGGTAACCTACCCGAAATGATAGCACACAGGCCAACATCTAGATGGATACATAACATCATGAATGACCTAAACACTGAAATCGCATGCATTCGCCTAGGTAACATTCATGTCATTCCAATCACTAGCCCTAAAATTGCCCGCGAAATATTGATAAAGAAAGATTCAATTTTCGCGTCGAGGCCTTTGAATTGGTCCAGCGAACATGTCTCAAGCGGGTACTTAAGTACAGTATTTGCACCCTATGGAGCACAATGGAAGAAGATGAAAAAGGTCATGGCAAATGAATTGGTGTCTCCAAGAAGACTTCAATGGCTACAAGATAAGAGGATGGAGGAAGCCGACAACATTGTTAGCTATGTTTACAAGCAATGCGATAAGAATAATGGTGGTGGCCTTGTGGATATCAGGTTGGTTTTCAATGCAAGGCACTTTGGTAAAGGAAAAGAAGATGGAGGACCTGGATTTGAGGAGGTGGAACATATAGATGCAATTTTCACTGTTTTGAGATACCTCTTTGCATTCTCCATCTCTGATTACGTTCCATGTTTGAGAGAGCTTGATTTGGATGGTCATAAGAAGGAGTTGAAGAAGGCCACTAAGTTGTTAATGAAGTATCATGACCCCTTAATCAAAGATAGGATTCAGCAATGGAAGAATGGCAAAAGGACACATGAAGAAGACTTGCTTGACGTTCTAATCTCATTGAAAGATGCTAATGATAATCCGCTTTTGACTCTTGATGAAATTAAGTGTCAAATTGTGGATATGATGGTTGCAACCGTGGACAATCCATCAAATATATTTGAATGGGGACTCGCTGAGATGCTAAATCAGCCGGAGATACTCCAAAAGGCGATGGAGGAAATAGATAGCGTTGTGGGCAAGGCAAGACAAGTTCAAGAATCAGACATTTTAAAACTTAACTATTTAAAAGCATGTGCAAAAGAAGTGTTTCGCCTCCATCCCATTGAAGACATTAATGCCACTCATGTTTCTATAGAGGACACATTTATTGCCAACAACACCTACTTCATTCCAAAAGGTAGCCATATAGTTCTAAGGCGACAAGGGATCGGACAAAATCCAAAAATATGGGAAGAACCATTAAAGTTTAAACCTGAACGCCATTTACAAAAAGATAATGATGGATTTAAGGATCTGAGTTTGAATGAGCCGAGTTTGAACTTGATCACATTCAGCATGGGAAGGCGTGCGTGTCCTGGGATCACGCTTGGGTCTACAATGACAATTATGTTGTTTGCTAGGATGTTGCATGGGTTCAATTGGAGTGTGTCACCAAATGAGACAACCATTGATCTCTCTGAATCAGAAGGAGGTACCATAAAAGGAAAGCCACTGGTAGCACTTGCAACGCCACGGTTACCAACGGAGGTGTATTGA 1566 0.41 MESATLMMSSLPFWYLILLLVGFITPFLKFLKHLIPSKSRRTRSLPPGPKPWPIIGNLPEMIAHRPTSRWIHNIMNDLNTEIACIRLGNIHVIPITSPKIAREILIKKDSIFASRPLNWSSEHVSSGYLSTVFAPYGAQWKKMKKVMANELVSPRRLQWLQDKRMEEADNIVSYVYKQCDKNNGGGLVDIRLVFNARHFGKGKEDGGPGFEEVEHIDAIFTVLRYLFAFSISDYVPCLRELDLDGHKKELKKATKLLMKYHDPLIKDRIQQWKNGKRTHEEDLLDVLISLKDANDNPLLTLDEIKCQIVDMMVATVDNPSNIFEWGLAEMLNQPEILQKAMEEIDSVVGKARQVQESDILKLNYLKACAKEVFRLHPIEDINATHVSIEDTFIANNTYFIPKGSHIVLRRQGIGQNPKIWEEPLKFKPERHLQKDNDGFKDLSLNEPSLNLITFSMGRRACPGITLGSTMTIMLFARMLHGFNWSVSPNETTIDLSESEGGTIKGKPLVALATPRLPTEVY 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc31808g00004 521 Pfam Cytochrome P450 46 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31808g00004 521 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 14 520 - -
Stsc31808g00004 521 PRINTS E-class P450 group I signature 323 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31808g00004 521 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31808g00004 521 PRINTS E-class P450 group I signature 100 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31808g00004 521 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31808g00004 521 PRINTS E-class P450 group I signature 303 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31808g00004 521 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31808g00004 521 PRINTS E-class P450 group I signature 409 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31808g00004 521 SUPERFAMILY Cytochrome P450 46 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31808g00004 521 Gene3D Cytochrome P450 32 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31808g00004 521 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 454 463 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc31808g00004 Stsc-Chr31808 8515 10786 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc31808g00004 7 521 Cytochrome P450 AT5G05260 50.657 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc31808g00004 - K14984 gmx:100809902 633.254