Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc31798g00001 ATGGCAAAAACATTTCATCCTTCAGCACTTCTCTTTCTGGTAACAATCACACTTTCCATTCTCAATTCAGAGCAACAAAGAATTCAACCGACACAATCTAAGGCTCTTCTAACAATCCAACGGCTATTAAACTTCCCTGCTGTTCTAAGCAGCTGGAATAGCAGCACAGACTTCTGCAGCTCAGATTCAAAGTCTTCTCTCACTGTTGTGTGCTATGAAGGCACCATAACTCAGCTCAACATTGTAGGGGAACAAGTTAGAGCTTCACTTCTTCCCAAAACTTTCTCAGTAGATTCCTTTGTCACAGCACTGGTAAAGTTTCCTACATTGAAAGTACTCACCCTTGTTTCTCTTGGAATTTGGGGTCCCTTGCCTGCTAAGATAGCTCGTTTGTCATCTCTTGAAATTCTTAATCTGAGCTCAAATTTTCTTTATGGCGCCGTCCCTCCGGAGCTTTCTTCGCTTTCTCATCTTCAAACACTTATTCTTGATGATAACATGTTTGCCAGCCATCTTCCAGACTGGCTGGATTCCTTTCCGGCCTTAACCGTGCTGAGTTTGAAGACTAATTCATTCAACGGTTCGCTTCCGGATTCCCTCGGTCAGTTAGAGAATCTTCGAGTTCTTTCGCTTTCTCATAACCAGTTTCATGGACCAGTACCTGACTTGAGCCGTTTGGCCAATCTTGAAGTTCTTGAATTGGATGACAATGCTTTTGGACCTGACTTTCCGAAGCTTGGTAGCAAGTTAGTTTCTTTAGTGCTAAGAAACAACAAGTTTAGATCTAATATCCCTGATGAAGTGAGCTCATATTATCAGCTCGAACGATTCGATATCTCTTCGAATTCCTTCGTTGGACCCTTCCAGCTGCAGCTATTATCACTTCCATCTATTACTTATCTCAACATTTCTGGAAACAGATTAACAGGAATGCTTTATGATAACATCTCTTGCAATTCTGAACTCCAAGCAGTGGATTTATCCTCTAATCTTTTGGTTGGAAGCTTACCGAAATGCTTGGTGTCGAATTCGAATGGCAGGACTGTCCGGTATGCTAGGAATTGTCTAGAGGAGACGGATCAAGATCAGCACGAATCGTCGTTTTGTCACACTGAAGCCATAGCAGTAGGAATATTATTACCTGAAAGGAAGAGGCACAGAAGAGTATCCAAGGCAATTCTCTCAAGTGTGATAGTTTGTGGAATTCTTGGAGTAGTAGCTGTTTTAGCACTGATTTTCTTTATGGTTAGAAGAGGAAATTCCAAAAGGAAAGTGAAGAATCCAACAACAAAATTGATATCAGAGAATGCAGCAGTAGCTTCTGGATACACCACTAAGCTACAATCTGATGCAAGGTATGTATCTCAAACAATGAAGTTCGGATCCGTTGGGCTGCCTCCTTATCGAGCATACTCACTGGAAGAGATTGAGTTAGCTACAAACAACTTCGACTCGGCTCGTTTCATGGGCGAAGGTTCTCAAGGACAGATGTACAGAGGTCAGCTTAGGGATGGTTCACTAGTTGCCATAAGATGTGTGAAAATGACAAAAAGTTTCAGCACTCAAGATTTCATGCACTACATAGAGCTGATATCAAAGTATAGGCATCTTCACTTAGTGAGTGCCCTTGGACACTGCTTTGAATGCTATTTAGATGATTCAAGTGTCAGCAGAATATTCCTTGTCTTTGAATATGTACCCAATGGCACACTCAAGAGCTGGATCTCAGATGGACATTATAGAAAATCCTTGAGCTGGACCCAAAGAATAGCAGCTGCAATTGGAGTTGCAAAGGGGATTGAGTTCTTGCATGCAGGGCTTGTCCCTGCTGCATTCTCAAACAATATCAAGATAACTGATGTTTTATTGGATCAGAATTTTGTTGCAAAGATCAGCAGTTACAACCTACCTTTGTTATCTAATATTGTAAAGATTGGAAGTGGAAATCTTTCCATTGGATTCAGAAGTCCTAGCTTTAAACAAAGTTTAAAACATGAAGATAAGTCTGATATTTATGACTTTGGAGTAATACTACTGGAACTCATTCTTGGAAGGACAATAAAGCCAAGGAATGTGGACACCTTAAAGGACCTGTTGCAAGCAAGCATAACAACAAACGACGAAGCTCGAAGGAGCATCGTAGATCCGGCGATTGGGAAGGTGTGCTTGGATGAATCACTGAAGACAGTGATGGAGGTGTGTGTGAGGTGTGTGGCTAAAGATCCATCAGAGAGACCCTCCATAGAGGATGTTCTGTGGAACTTGCAGTTTGCTGCTCAAGTTCAAGATGCATGGAGAGTGGATTCTCAAAGCCAAAGCAGTGATGGATCTTCCATATCTACTCCTTTGGCCTCGCCACCAATGAACTTCCATTAG 2376 0.4184 MAKTFHPSALLFLVTITLSILNSEQQRIQPTQSKALLTIQRLLNFPAVLSSWNSSTDFCSSDSKSSLTVVCYEGTITQLNIVGEQVRASLLPKTFSVDSFVTALVKFPTLKVLTLVSLGIWGPLPAKIARLSSLEILNLSSNFLYGAVPPELSSLSHLQTLILDDNMFASHLPDWLDSFPALTVLSLKTNSFNGSLPDSLGQLENLRVLSLSHNQFHGPVPDLSRLANLEVLELDDNAFGPDFPKLGSKLVSLVLRNNKFRSNIPDEVSSYYQLERFDISSNSFVGPFQLQLLSLPSITYLNISGNRLTGMLYDNISCNSELQAVDLSSNLLVGSLPKCLVSNSNGRTVRYARNCLEETDQDQHESSFCHTEAIAVGILLPERKRHRRVSKAILSSVIVCGILGVVAVLALIFFMVRRGNSKRKVKNPTTKLISENAAVASGYTTKLQSDARYVSQTMKFGSVGLPPYRAYSLEEIELATNNFDSARFMGEGSQGQMYRGQLRDGSLVAIRCVKMTKSFSTQDFMHYIELISKYRHLHLVSALGHCFECYLDDSSVSRIFLVFEYVPNGTLKSWISDGHYRKSLSWTQRIAAAIGVAKGIEFLHAGLVPAAFSNNIKITDVLLDQNFVAKISSYNLPLLSNIVKIGSGNLSIGFRSPSFKQSLKHEDKSDIYDFGVILLELILGRTIKPRNVDTLKDLLQASITTNDEARRSIVDPAIGKVCLDESLKTVMEVCVRCVAKDPSERPSIEDVLWNLQFAAQVQDAWRVDSQSQSSDGSSISTPLASPPMNFH 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc31798g00001 791 SUPERFAMILY Protein kinase-like (PK-like) 463 757 IPR011009 -
Stsc31798g00001 791 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 106 755 - -
Stsc31798g00001 791 SMART LRR_typ_2 203 226 IPR003591 -
Stsc31798g00001 791 SMART LRR_typ_2 131 154 IPR003591 -
Stsc31798g00001 791 SMART LRR_typ_2 155 179 IPR003591 -
Stsc31798g00001 791 SMART LRR_typ_2 295 319 IPR003591 -
Stsc31798g00001 791 ProSiteProfiles Protein kinase domain profile. 483 757 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc31798g00001 791 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 29 248 - -
Stsc31798g00001 791 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 566 771 - -
Stsc31798g00001 791 Pfam Leucine rich repeat 156 216 IPR001611 GO:0005515
Stsc31798g00001 791 MobiDBLite consensus disorder prediction 770 791 - -
Stsc31798g00001 791 ProSiteProfiles Leucine-rich repeat profile. 205 227 IPR001611 GO:0005515
Stsc31798g00001 791 Gene3D Ribonuclease Inhibitor 249 374 IPR032675 -
Stsc31798g00001 791 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 456 565 - -
Stsc31798g00001 791 SUPERFAMILY L domain-like 32 357 - -
Stsc31798g00001 791 Gene3D Ribonuclease Inhibitor 29 248 IPR032675 -
Stsc31798g00001 791 Gene3D Transferase(Phosphotransferase) domain 1 566 777 - -
Stsc31798g00001 791 Gene3D Phosphorylase Kinase; domain 1 443 565 - -
Stsc31798g00001 791 Pfam Protein tyrosine and serine/threonine kinase 487 752 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc31798g00001 Stsc-Chr31798 3770 7259 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc31798g00001 45 791 Miscellaneous Gene Families AT3G03770 60.662 0.0 876
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Stsc31798g00001 PK_Tyr_Ser-Thr 7.8e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc31798g00001 - - gmx:100813207 1163.67