Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc31794g00004 ATGGACTTGGAAAACCTCCTCTCCCAACTACCCATATTCACCATGGCTGTTCTGTTCTTCTGTCTTTTCTTTGCTTTTTCATTTCTATCAAGAAGGCACACCCACAAACCCGGAGCAAGAAAAGAACCACCAGAAGCTGGAGGAGCATGGCCGCTAATCGGGCACCTCCACCTCTTAGGTGGCCCACAGCCACCGCACGTCACCTTGGGCAACATGGCTGACAAATATGGACCCATCTTCACCATACGCATTGGCGGCCGCAAGAATTTGATCGTGAGTAACAGCGAGCTGACCAAAGAGTGTTTCACTGTGAACGACATAGCTTTCGCTGGTCGTCCTAAAACGGTGGCCTTTGAAGTTCTGGGTTACGACTACGCCATTTTCTCGTTGAATTCCTATGGCTCCTATTGGCGTGACCTCCGCAAGACGGCCATCGTGGAAGTCCTCTCCAACCACAAGATACACATGAACAGTCACGTGATGCTATCAGAGGTGAAAACCGCAATGAAAGATAGTTACAACAACAAGAGTATGGTGGCTACAGAGATGGCTAAATGGTTTGGGGAGATTAGCCTGAACGTGTTGTTCAGATTGGTGGTGGGAAAACGATTCACTGGACACAGTGAAGAGAACGAAAAGATGAGGAACGCGCTGAGGAATTTCTTTGATCTTGCTGCGTCGTTCGTGGTTGGTGATGCAATTCCGTGGTTGAGATGGTTGGATTTGGATGGGGGAGAGAAGGCCATGAAGAAAACGGCAAAAGAGTTGGATGAATTTATGCATACGTGGTTAGATGAACACAGACGACGTAGCAAAAACCGTGGCGAAGAAGGTGATTACATGGACGCGCTTATTTCCAATGTCGATCAAGCCTCTAACGGTCTCGATGTTGATGCAATAATCAAAGCTACATGCGTGACACTACTTTTGGCCGGTACAGACACAACAACTGGAACACTTACTTGGGCTCTTGCTTTACTTTTGAATAACCGCCACGTCCTAAATAAAGTTATTCATGAATTAGACACACAAATAGGAAAAAATAGAACAGCCTCAGACACAGATCTAAAGAATCTAGTGTATCTTCAAGCTGTTGTCAAAGAAACATTACGCTTGTATCCTCCTGTGGTGCTTAATGTGCCTCACCAATCTATGAAAGATTGTGTGGTGGGTGGATACCATATTCCTGCTGGCACACAGCTCTGGAATAATATTTCGAAAATACAACGGGATCCTACTTTATATGATGATCCATTAGAGTTTCGACCAGAGAGGTTTCTTACAACTCATAAAGATATCGACCTTAGGGGTCAGCATTTTGAATTGATTCCATTTGGTGCAGGAAGAAGAATGTGTCCTGGAATGTCATTTGGTCTTCAAATGGTACAATTAACTCTTGCTAATGTGTTGCATGGGTTTGATATTGTAACGGTTGATGGAAAACCAGTTGATATGGTTGAACGTTCTGGATTAACCAATGCTAAAGCCAATCCCCTTGAAGTCATTCTAACACCACGTCTCTCTGCCGAAGCTTATGCTTAA 1542 0.4468 MDLENLLSQLPIFTMAVLFFCLFFAFSFLSRRHTHKPGARKEPPEAGGAWPLIGHLHLLGGPQPPHVTLGNMADKYGPIFTIRIGGRKNLIVSNSELTKECFTVNDIAFAGRPKTVAFEVLGYDYAIFSLNSYGSYWRDLRKTAIVEVLSNHKIHMNSHVMLSEVKTAMKDSYNNKSMVATEMAKWFGEISLNVLFRLVVGKRFTGHSEENEKMRNALRNFFDLAASFVVGDAIPWLRWLDLDGGEKAMKKTAKELDEFMHTWLDEHRRRSKNRGEEGDYMDALISNVDQASNGLDVDAIIKATCVTLLLAGTDTTTGTLTWALALLLNNRHVLNKVIHELDTQIGKNRTASDTDLKNLVYLQAVVKETLRLYPPVVLNVPHQSMKDCVVGGYHIPAGTQLWNNISKIQRDPTLYDDPLEFRPERFLTTHKDIDLRGQHFELIPFGAGRRMCPGMSFGLQMVQLTLANVLHGFDIVTVDGKPVDMVERSGLTNAKANPLEVILTPRLSAEAYA 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc31794g00004 513 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Stsc31794g00004 513 SUPERFAMILY Cytochrome P450 49 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31794g00004 513 Gene3D Cytochrome P450 33 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31794g00004 513 PRINTS E-class P450 group I signature 190 208 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31794g00004 513 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31794g00004 513 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31794g00004 513 PRINTS E-class P450 group I signature 404 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31794g00004 513 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31794g00004 513 PRINTS E-class P450 group I signature 97 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31794g00004 513 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31794g00004 513 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31794g00004 513 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31794g00004 513 FunFam Cytochrome P450 82C4 33 504 - -
Stsc31794g00004 513 PANTHER CYTOCHROME P450 82C3-RELATED 18 512 - -
Stsc31794g00004 513 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31794g00004 513 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31794g00004 513 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31794g00004 513 Pfam Cytochrome P450 46 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc31794g00004 Stsc-Chr31794 9198 10934 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc31794g00004 15 512 Cytochrome P450 AT4G31940 43.786 7.29e-159 460
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc31794g00004 - - gmx:100787630 619.387