Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc31774g00001 ATGCAGGAGGAGAACAACTCCGCAGTGGCATTGCTCTTCAGCTCCGACGGCGGCGCCACACTCAACGGCCTCCTGGAAGACGAGAGCACCGCAACCACGACTACGTCCACCGCTACGGCGATGTCGTCGGACGGGAGATCGTTCTCTCCGGCAGTGGTCGGCGGCGGTGCCGACGGTGGCTGGCTTGTTCGGAGAGCGATGAGGAGGAGAGAGGAAAATGGGAGCGAAGAGAGGTGGGTGTGTTATTCAGAAGTTGTGGAGAAGAAAGAAACGATGGAGGAAGTAACGAGTTATGGCGGAACGACGACGTCGTTTGGGTTGTTATCGCTGAAGCTGGATCATGAAGGGATATTGAATGCTTGGTCTGATAAGGGCTCTCTTTACGTTGCAGGGGAGGGCCCACAGGCTGTCCCTGATTTCCAGAATGATGCTGATGCCATCCTCTTCCATGATGCCCTTCTTCCCAATAATATTGGAGGTGAAGGGTGTGGGAGTAGTAATGATGCCATTGGCAACACATGGGTTGTACCGGAGATTCGTGCAGACAACAGGACGACCATGATGACAACAACGACGACGGAAGAAATGGGATTTAAGCTGGGGCTGAGAGAGGCAAGCGTGCAGAGATACAAAGAGAAGAGACAGAACAGGCTCTTCTCTAAGAGGATCCGTTATGAAGTGCGCAAGCTCAATGCCGAGAAGCGGCCTCGGATGAAGGTAAAACTATCTTTCAGTTATTTACTGACATTGTTAAAGGATTTCATTGCTTCTTTCCATTTTATGCAGAAAATATTCTATCCTGTTATGTGTTCAAGTTATTGGAAGCATTTCATGTGTACTATAGTGTCAGGTGTTCCACTGG 862 0.5035 MQEENNSAVALLFSSDGGATLNGLLEDESTATTTTSTATAMSSDGRSFSPAVVGGGADGGWLVRRAMRRREENGSEERWVCYSEVVEKKETMEEVTSYGGTTTSFGLLSLKLDHEGILNAWSDKGSLYVAGEGPQAVPDFQNDADAILFHDALLPNNIGGEGCGSSNDAIGNTWVVPEIRADNRTTMMTTTTTEEMGFKLGLREASVQRYKEKRQNRLFSKRIRYEVRKLNAEKRPRMKVKLSFSYLLTLLKDFIASFHFMQKIFYPVMCSSYWKHFMCTIVSGVPL 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc31774g00001 287 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 19 239 - -
Stsc31774g00001 287 ProSiteProfiles CCT domain profile. 203 245 IPR010402 GO:0005515
Stsc31774g00001 287 MobiDBLite consensus disorder prediction 27 46 - -
Stsc31774g00001 287 MobiDBLite consensus disorder prediction 27 49 - -
Stsc31774g00001 287 Pfam CCT motif 203 240 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc31774g00001 Stsc-Chr31774 5965 8358 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc31774g00001 108 239 C2C2-CO-like Transcription Factor Family AT1G73870 38.346 1.20e-16 77.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Stsc31774g00001 CCT 2e-14 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc31774g00001 - - gmx:100798231 241.121