Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc31710g00001 ATGGGACAAGAATCAGATTACAAAACCCAACTGGTATTGGAGATTTGCTCAATTTCCACACGTTCTGTTGTATGTGTTAATCATAGACATGTCCCTAACAAAACTAAAAAGCCACCTTTCATTGATTGGTACTGCATCCTCGGAGTGGCAGGAAATGCAGATGTAAATACAATTCGCAAGCAATACCATAAACTTGCTTTACAACTTCATCCAGATAAGAATAAACACCCCAAGGCTGAAATTGCATTCAAGCTTCTATCTGAGGCATATGCATGTCTATCTGATGCAGCAAAAAGGAAAGCGTTTAACTTGGAGAGAAGCAAGAGCTTATGCATTGAATGCAACAAGAACAACAACAATGGATCTTCTTCTTCAAGTTTCAAATCATCAAGGAGTAGTGGTATCAGCAGTAGTAGTTCAAGATCATGTAAGCTTTGGAGAAACATTCAGGACATAAGAGAAAGATTAAGGGAAGAGGCTGAGGTGATAGAGAATTGTTTAAGGGTAAATAATTCAGTGCCAACAAAGAATTATCATGATGATGCTAGAGTTGAGAAAGAAACACCAGTTTTCAATCCATCAAATTACTTGTACCAAGGGTACCCTCATCATAGGAGAAAAAATCATGTTAATCACAAGGATTGTTACTCTGAGAATTTTTGGTACTTGCAGCAAAAAAATAATGCAGGATCAGATAAGTTTGCTTCACCAGTTTTTGAGGTTGAAACACAGAGGAGCATGTTCAGTAGAAAATTTGCTCCCATCCCTTCGCAATGTTAG 780 0.3769 MGQESDYKTQLVLEICSISTRSVVCVNHRHVPNKTKKPPFIDWYCILGVAGNADVNTIRKQYHKLALQLHPDKNKHPKAEIAFKLLSEAYACLSDAAKRKAFNLERSKSLCIECNKNNNNGSSSSSFKSSRSSGISSSSSRSCKLWRNIQDIRERLREEAEVIENCLRVNNSVPTKNYHDDARVEKETPVFNPSNYLYQGYPHHRRKNHVNHKDCYSENFWYLQQKNNAGSDKFASPVFEVETQRSMFSRKFAPIPSQC 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc31710g00001 259 MobiDBLite consensus disorder prediction 120 139 - -
Stsc31710g00001 259 ProSiteProfiles dnaJ domain profile. 42 106 IPR001623 -
Stsc31710g00001 259 PRINTS DnaJ domain signature 78 98 IPR001623 -
Stsc31710g00001 259 PRINTS DnaJ domain signature 62 77 IPR001623 -
Stsc31710g00001 259 PRINTS DnaJ domain signature 44 62 IPR001623 -
Stsc31710g00001 259 Gene3D DnaJ domain 41 158 IPR036869 -
Stsc31710g00001 259 SUPERFAMILY Chaperone J-domain 36 104 IPR036869 -
Stsc31710g00001 259 CDD DnaJ 42 95 IPR001623 -
Stsc31710g00001 259 SMART dnaj_3 41 98 IPR001623 -
Stsc31710g00001 259 ProSitePatterns Nt-dnaJ domain signature. 83 102 IPR018253 -
Stsc31710g00001 259 PANTHER BNAC03G44070D PROTEIN 20 201 - -
Stsc31710g00001 259 Pfam DnaJ domain 42 103 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc31710g00001 Stsc-Chr31710 1012 2078 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc31710g00001 22 103 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 39.080 1.23e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc31710g00001 - - adu:107483537 403.29