Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc31675g00001 ATGGTCAGAGTTAATCTTCATTTTTCCTATGTACTATTGCTCATTTACTTCATTTTTTGGGTCTTGCTTAACACCACACAAGCTGATGATGATATTGGTGTTTACTGGGGCCAAAATGATAATGAGGGAACTCTTGCTAATACATGTGCATCAAGAAAATACTCCATTGTAAACTTAGCATTCCTTACCACATTTGGAAATGGTGAATCTGCAGTACTAAACCTGGCAGGTCATTGTAATGCTTCTTCAAAAGGGTGCACTGGTCTTAGCTTAGATATCAAGAATTGCCAGAAGAAAGGGATCAAGGTCATGCTCGCGATCGGAGGAGGATCCAGTACTTCCCAGCTGACTTCTTCTGAAGATGCTAAAACTGTTGCTGATTACCTCTGGAGCAATTTCTTGGGTGGTAATTCATCTTCGCCGCGCCCTCTTGGGGACGCGGTGTTAGATGGGATAGAATTTAGCCCAGGTGATAATGGATACTCAATATACTGGATGGACCTTGCGCGTTACCTCAAGTCGGAATCAACACAGAATGTTACCATAAGTGCAGCTTCTCAGTGTCCCTTTGTCAGTGCTGAGAACTCTACCTTTAACAGTGGATTTTTCGACTATCTTTCGATACAATTCTACAACAATCCTCCATGCGATTTTGTGAGTAGCAGTACTAGTGGATTCATAAATACATGGAACCAATGGACCAATTTGAAAGTGAAGAAAATATTTCTGGGGTTGCCAGCATCTTCTGATGCAGCTGCATCTGGCTATATTCCTGCAAATTTGTTAAATTCTGAGGTGCTTCCAATCATAAGGAACTCATCTAAGTATGGAGGCTTAGTGTTGTGGGACAGATACAATGATGTTAAGAGCAATTATAGTGATTCCATCAAATTCAATGCAGAAGGGCAAGCACCCAGTCCTGTGGAAAGCATCAAACCTCATGCAGAAGGGCAAGCACCTAGTCCTGTGGAAAGCATCAAACCTCATGCAGGAAGCAGAAAACACCATATAGTTATAAGGATTGTTATTGGTGTGGGAGCTGCAATTGCAATAAGTTTAATTTGCTACTTTAGCTGTGTATGTTGGAGGAAGTACAAAGCAGAAGGTGAGTTGGGTCCCGGGGCTCACCAAGGCCAGGGCATGCCTGAGCTCTTACAAAGGTACTTACAGATCGCCTACCAACAAGGTCCTCACATCGGCAGCGGGACTCGAACTCACAACCTTGTGGGTTATGAGCCGACTCCTTACCAACTGGACCAACATTTGTTGGCGATCCTTAAGCAAAAGAAGCTAATACATGACATTGGAGGTACCGCAATGCTCTCCAGGATGAATTATATAGCAAAAAAGTTTAGAACTGAGACTAACACAAGCGATGAGATCGAAATATTCAGTTTCGAAAGCATGGTTGCTGCTACAAACAATTTCTCAAGCTCAAATAAGCTTGGTGAAGGAGGATTTGGACCTGTTTATATGGGTACATTGACAAACCAACAAGAAATCGCGATAAAGCGACTGTCTATGAGTTCGGGACAAGGGCTAACAGAGTTTAAGAATGAAGCTAAACTCATTGCAAAACTCCAGCACACTAATCTTGTGAAGCTTATAGGGCTCTGCATCCAAAGAGAAGAAAGAATGTTGGTCTATGAATACATGTCCAATGGAAGCTTAGACTTGCACTTATTTGATGCAGAAAGAAGAAATGTTTTGGATTGGGAAAAGCGGCTTAACATTATAGAAGGCATTGCTCAAGGACTATTATATCTTCATAAGTATTCGAGGCTAAAAGTGATTCATCGCGATTTGAAAGCGAGCAATATATTACTTGATGATGAGATGAAACCTAAGATATCGGATTTTGGTATGGCTAGAATACTTGGACTAACAGGTTCTGAAGAGAAAACAAACCGAATTGTCGGAACACATGGTTACATGTCTCCGGAGTATATGTTAAATGGCGTCGTCTCCCCAAAAGTAGATGTTTTCAGCTTCGGCGTATTGCTGCTAGAGATTCTCAGTGCAAGAAAGAATAACTCCTCTTACAACACTGATTTTCCACTGCTCAATCTCATTGGATATGCATGGAAGTTATGGAATGAAGGTAGAGCTCTAGAGCTAATGGATCGTGGATTAAATGAAACAAGCAACCCTAAAGAAGTACTGAGATGTATCCACATTGGTCTGTTATGTGTGCAAAACCATCCAACAGATAGACCTACCATGGTTGATGTTGTCTCTTTTCTGTCAAATGATGCTATCCAACTTGCTCAGCCAAAGCAGCCAGCATTCTTCATTGATGTTGATACAAACCTTCAACAATTGCATAGTAGCACACAAGAAATTTTCTCAAAAAATAGTGTGACAGTATCTGATGTGAATGGCAGATGA 2388 0.4129 MVRVNLHFSYVLLLIYFIFWVLLNTTQADDDIGVYWGQNDNEGTLANTCASRKYSIVNLAFLTTFGNGESAVLNLAGHCNASSKGCTGLSLDIKNCQKKGIKVMLAIGGGSSTSQLTSSEDAKTVADYLWSNFLGGNSSSPRPLGDAVLDGIEFSPGDNGYSIYWMDLARYLKSESTQNVTISAASQCPFVSAENSTFNSGFFDYLSIQFYNNPPCDFVSSSTSGFINTWNQWTNLKVKKIFLGLPASSDAAASGYIPANLLNSEVLPIIRNSSKYGGLVLWDRYNDVKSNYSDSIKFNAEGQAPSPVESIKPHAEGQAPSPVESIKPHAGSRKHHIVIRIVIGVGAAIAISLICYFSCVCWRKYKAEGELGPGAHQGQGMPELLQRYLQIAYQQGPHIGSGTRTHNLVGYEPTPYQLDQHLLAILKQKKLIHDIGGTAMLSRMNYIAKKFRTETNTSDEIEIFSFESMVAATNNFSSSNKLGEGGFGPVYMGTLTNQQEIAIKRLSMSSGQGLTEFKNEAKLIAKLQHTNLVKLIGLCIQREERMLVYEYMSNGSLDLHLFDAERRNVLDWEKRLNIIEGIAQGLLYLHKYSRLKVIHRDLKASNILLDDEMKPKISDFGMARILGLTGSEEKTNRIVGTHGYMSPEYMLNGVVSPKVDVFSFGVLLLEILSARKNNSSYNTDFPLLNLIGYAWKLWNEGRALELMDRGLNETSNPKEVLRCIHIGLLCVQNHPTDRPTMVDVVSFLSNDAIQLAQPKQPAFFIDVDTNLQQLHSSTQEIFSKNSVTVSDVNGR 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc31675g00001 795 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 441 551 - -
Stsc31675g00001 795 Gene3D Transferase(Phosphotransferase) domain 1 552 762 - -
Stsc31675g00001 795 Gene3D Glycosidases 31 300 - -
Stsc31675g00001 795 CDD STKc_IRAK 482 748 - -
Stsc31675g00001 795 ProSitePatterns Serine/Threonine protein kinases active-site signature. 597 609 IPR008271 GO:0004672|GO:0006468
Stsc31675g00001 795 FunFam Acidic endochitinase SE2 30 300 - -
Stsc31675g00001 795 Gene3D Phosphorylase Kinase; domain 1 449 551 - -
Stsc31675g00001 795 CDD GH18_hevamine_XipI_class_III 31 297 IPR045321 -
Stsc31675g00001 795 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 30 303 IPR001223 GO:0005975
Stsc31675g00001 795 MobiDBLite consensus disorder prediction 301 329 - -
Stsc31675g00001 795 ProSiteProfiles Protein kinase domain profile. 476 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc31675g00001 795 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 140 791 - -
Stsc31675g00001 795 SUPERFAMILY Protein kinase-like (PK-like) 458 785 IPR011009 -
Stsc31675g00001 795 SUPERFAMILY (Trans)glycosidases 30 297 IPR017853 -
Stsc31675g00001 795 Pfam Protein tyrosine and serine/threonine kinase 479 748 IPR001245 GO:0004672|GO:0006468
Stsc31675g00001 795 SMART serkin_6 476 748 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc31675g00001 795 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 552 756 - -
Stsc31675g00001 795 Pfam Glycosyl hydrolases family 18 32 260 IPR001223 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc31675g00001 Stsc-Chr31675 1071 4974 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc31675g00001 443 795 Receptor kinase-like Gene Family AT4G11480 49.171 1.96e-114 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc31675g00001 PK_Tyr_Ser-Thr 1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc31675g00001 - - aip:107617580 684.485