Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc31580g00003 | ATGAGTAACAACACCATTATTCTTGTTTTCATCTTCTTCTTTTTCTTTGCAACTCTGCAACACTCCTCCTCTCAAAACATTGATGACACTACCTCATCGTACTCCATTTGCAGCAAACCATTCAGCTGTGGAACACTCATCACCAACGTATCTTACCCTTTCTGGGGAGGAAACAGACCCCAGTTTTGTGGAACCCATGGTTTCAAACTCACCTGCACCACCAACTACAACAATCAAACAACTGCTTCACTTCAAGTTGGTGTGCAAAACTTCCATGTCCTTGCTATCAACCAAACTCAGAGTACCATGAGAATCGTCAGAACAGACTTTATCTATGATCACTGTTCTTCTTCCAATAATAATCTTACCAACACTTCCCTCAACGGAAGTCCCTTCACTTTTCTCCCAAACACCCTTCAAAACATCACTATATTCTATGATTGTCCATCTGGGAATCATTCAGTTCTGGGAGAAACTAACACTTTTACGTGCCAGAATGATAGCAGAAACCACGGTTTCTATGCTGTCAATGCAACTCAGACTCAGCAGTTCCGGAACTGTGGGGTTAGTGTTGAGGTGCAAGTTTCAAGGGACAATGGTGTTTCTGGGAATAATAATCTCAAGAAAGCACTGGATGAAGGGTTTGAAGTGCAGTATGATGCAGATTTGTCTTCAGAGTGCAAAACATGCACTGAATCTGGTGGAGTATGTGGCACCAACAACACTGATTCCTCTGATCAGTTTTCATGTTATTGCCCCACTGGAACTCATGCAGCTTCTTCCTGTTCTTCTCATCATAAGAGTAGTAAGAAGCACAAAGTCTTGAAGCTAGTATTAGGTTTCCTAGGTACTGGAATTGGACTACCTCTGATTGCTGTGATCATATGCCGTAACAAAGCTAAGGTGTGGAAGTTCATAAAGAATCAATTGGGGTTGATGAACAAGCATGATCGAAATCTAGAAGCCTTTCTAGAAAGCCAAGGTCCACTTGGCATAAAAAGATATAGTTTCTCTGATGTGAAGAAAATGACCAACTCCTTCAAACTCAAACTCGGAGAAGGAGGCTATGGTTCTGTTTACAAGGGAAAACTACCCAATGGTTCCTCTGTGGCTGTAAAGATTCTGAATGACTCCAAAGGTAATAATGGTGAAGAATTCATCAATGAAGTTGCCAGCATTAGCAAAACATCCCATGTTAATGTTGTCACTCTGGTCGGGTTCTGCCTCGAAGGAAGCCGAAAAGCTCTAGTCTATGAATTCATGCCTAATGGTTCTCTGGAAAAGTTTATTCATAAAAAGAAAGATCAGAGCACTCCATCCCTGAGTTGGGACAAGCTGTACCAGATTGCAACAGGGATAGCTAAAGGATTGGAGTACTTGCACAAAGGATGCAACACTAAGATTGTACATTTCGACATTAAGCCTCATAATATTCTCTTGGATGAGAATTATCGTCCAAAGATATCGGATTTTGGACTGGCTAAGCTCGGCACGAAGGATGAGAGCATTATGTCAATGTCATATGCTAGAGGGACAATTGGATATGTAGCTCCGGAAATGTGCAACAAGAGTTTAGGAGGCGTGTCTCATAAGTCTGATGTGTATAGTTACGGTATGATGCTGTTAGAAATGGTTGGAGGACACAAGAATGCGAACGTTGAAGCGAGTCGTTCGAGCGAGATATACTTTCCACAATTGCTGATTTACAAGAAGCTTGAGCTTGGGAGTGATTTGGGAGTTGATGGAGTGATGAGTGCAGAAGAAAATGAATTGGCAAAGAAAATGACTATGGTGGGTTTGTGGTGCATTCAGACAATTCCGTCTCAAAGACCAACCATTAGCAGAGTGATTGACATGTTGGAAGGTAGCATGGATTCTATGGAAATGCCACCAAAACCAACACTGTCATCTCCTCCAAGATCCACAACAGACTTTTCCACTGCATCATTGTCAGGGGATAGTGCCTGA | 1968 | 0.4202 | MSNNTIILVFIFFFFFATLQHSSSQNIDDTTSSYSICSKPFSCGTLITNVSYPFWGGNRPQFCGTHGFKLTCTTNYNNQTTASLQVGVQNFHVLAINQTQSTMRIVRTDFIYDHCSSSNNNLTNTSLNGSPFTFLPNTLQNITIFYDCPSGNHSVLGETNTFTCQNDSRNHGFYAVNATQTQQFRNCGVSVEVQVSRDNGVSGNNNLKKALDEGFEVQYDADLSSECKTCTESGGVCGTNNTDSSDQFSCYCPTGTHAASSCSSHHKSSKKHKVLKLVLGFLGTGIGLPLIAVIICRNKAKVWKFIKNQLGLMNKHDRNLEAFLESQGPLGIKRYSFSDVKKMTNSFKLKLGEGGYGSVYKGKLPNGSSVAVKILNDSKGNNGEEFINEVASISKTSHVNVVTLVGFCLEGSRKALVYEFMPNGSLEKFIHKKKDQSTPSLSWDKLYQIATGIAKGLEYLHKGCNTKIVHFDIKPHNILLDENYRPKISDFGLAKLGTKDESIMSMSYARGTIGYVAPEMCNKSLGGVSHKSDVYSYGMMLLEMVGGHKNANVEASRSSEIYFPQLLIYKKLELGSDLGVDGVMSAEENELAKKMTMVGLWCIQTIPSQRPTISRVIDMLEGSMDSMEMPPKPTLSSPPRSTTDFSTASLSGDSA | 655 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc31580g00003 | 655 | Gene3D | Phosphorylase Kinase; domain 1 | 322 | 420 | - | - | |
Stsc31580g00003 | 655 | CDD | STKc_IRAK | 351 | 622 | - | - | |
Stsc31580g00003 | 655 | MobiDBLite | consensus disorder prediction | 624 | 655 | - | - | |
Stsc31580g00003 | 655 | ProSiteProfiles | Protein kinase domain profile. | 345 | 635 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc31580g00003 | 655 | Pfam | Wall-associated receptor kinase C-terminal | 173 | 254 | IPR032872 | - | |
Stsc31580g00003 | 655 | ProSitePatterns | Protein kinases ATP-binding region signature. | 351 | 373 | IPR017441 | GO:0005524 | |
Stsc31580g00003 | 655 | PANTHER | RUST RESISTANCE KINASE LR10-RELATED | 315 | 637 | IPR045874 | GO:0004672 | |
Stsc31580g00003 | 655 | MobiDBLite | consensus disorder prediction | 638 | 655 | - | - | |
Stsc31580g00003 | 655 | Gene3D | Transferase(Phosphotransferase) domain 1 | 421 | 632 | - | - | |
Stsc31580g00003 | 655 | FunFam | PR5-like receptor kinase | 421 | 632 | - | - | |
Stsc31580g00003 | 655 | SUPERFAMILY | Protein kinase-like (PK-like) | 325 | 621 | IPR011009 | - | |
Stsc31580g00003 | 655 | SMART | serkin_6 | 345 | 620 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc31580g00003 | 655 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 468 | 480 | IPR008271 | GO:0004672|GO:0006468 | |
Stsc31580g00003 | 655 | Pfam | Wall-associated receptor kinase galacturonan-binding | 37 | 107 | IPR025287 | GO:0030247 | |
Stsc31580g00003 | 655 | FunFam | serine/threonine-protein kinase PBS1-like | 313 | 420 | - | - | |
Stsc31580g00003 | 655 | Pfam | Protein kinase domain | 350 | 617 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc31580g00003 | Stsc-Chr31580 | 10406 | 13780 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc31580g00003 | 37 | 635 | Receptor kinase-like Gene Family | AT5G38260 | 41.748 | 3.41e-144 | 432 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRK10L-2 | Stsc31580g00003 | Pkinase | 3.5e-48 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc31580g00003 | - | - | vra:106766588 | 875.544 |