Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc31580g00001 ATGGTGAAGAACATGCAGAAGCTGTTCTCAGCAGGGCTGGAGCCATTGCTAAGAAGAGTGGTAAATGAAGAAGTGGAACGAGTCATAATGAGACACCACCATCCCTACACACGCTCTCCATCACTCAGGATTGAAGCAGCAGCACCATCATCATCATCATCAGAGCAACAATCCAAGTTGCAACTCATGTTCACCAACAAGCTTTCCCTCCCAATATTCACAGCAAGCAGAATACTCGACATTCAAGGGAACCCCATGCAAGTGATTCTCGTTCACAGAACCAACAAAGATCAAATTGTTCGAACAAGCCTTCCCTATCCCGTAAAGCTAGAGCTCGTGGTTCTTGATGGTGATTTTCCGGGCGACGGCGACGATTCGTGGTGCAGCGAGCAGTTTAAGAGGCATATAGTGAAGGAGAGAACGGGGAAGAGGCCGTTGCTGACTGGAGAATTGAGCCTGACGATGAGGGATGGGATTGCAGGGATGAATGGGGACATTGAGTTCACGGATAACTCAAGCTGGATCCGTAGCAGAAAGTTCAGAGTTGCTGTCAGGGTTGCTCCTAACCAACAAGGTGATGGTCTCAGAATTCGTGAAGGATTCACTGAACCCTTCGTAGTTAAGGATCATCGTGGTGAATTGTACAAAAAGCATCACCCACCAATGCTGGAGGACGAAGTGTGGCGCCTTGAAAAGATTGGAAAAGATGGAGCTTTCCACAAAAAGCTCTCAGCAGAGGGGATTAATACAGTCCAAGAATTCCTCAAGTTATCCGTTCTTGATCCTCAATTGCTTAGAAAGATATTAGGGGTTGGAATGTCAGAGAAGATGTGGGAAGTGACAATAAAGCATGCAAAGACATGTAAGATGGGTAACAAAGCTTATATGTACACCCGCCCTAATTGTACTATCTATCTCAATCCAATATGCCAGTTGATTAGAGCTGATATCAATGGCCAGATCCTGGTAGGCAGAGACCTAAACAGCATCAATAAGATCTATTTAGAGAAGATGGTGAGAGAAGCACATGGTAGATGGAATGAGTTGGAGGAAATTGATCATGCCATTTTGAATGATAACGCTGCTTTGTTAACACAAGGTATGTTGACACAATTAGAGATACTATTATGA 1131 0.4465 MVKNMQKLFSAGLEPLLRRVVNEEVERVIMRHHHPYTRSPSLRIEAAAPSSSSSEQQSKLQLMFTNKLSLPIFTASRILDIQGNPMQVILVHRTNKDQIVRTSLPYPVKLELVVLDGDFPGDGDDSWCSEQFKRHIVKERTGKRPLLTGELSLTMRDGIAGMNGDIEFTDNSSWIRSRKFRVAVRVAPNQQGDGLRIREGFTEPFVVKDHRGELYKKHHPPMLEDEVWRLEKIGKDGAFHKKLSAEGINTVQEFLKLSVLDPQLLRKILGVGMSEKMWEVTIKHAKTCKMGNKAYMYTRPNCTIYLNPICQLIRADINGQILVGRDLNSINKIYLEKMVREAHGRWNELEEIDHAILNDNAALLTQGMLTQLEILL 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc31580g00001 376 Pfam Calmodulin binding protein-like N-terminal domain 60 210 IPR046831 -
Stsc31580g00001 376 Pfam Calmodulin binding protein C-terminal domain 293 352 IPR046829 -
Stsc31580g00001 376 PANTHER OS02G0177800 PROTEIN 3 360 IPR012416 GO:0005516
Stsc31580g00001 376 Pfam Calmodulin binding protein central domain 222 288 IPR046830 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc31580g00001 Stsc-Chr31580 3091 6303 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc31580g00001 2 359 Calmodulin-binding Proteins AT5G57580 47.368 7.07e-103 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc31580g00001 - - aip:107644281 468.003