Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc31559g00002 ATGGGAGTTTCTTCACACCCTTTTTCCTCTTCTCTTGTTTCCCTCTCTTTGGATGATCTTGAAGGACTCAATGATCCATCAAATTTGTGGAAGCAGAAGTTGAGTGTCAAGGGTAGGAGACCACCAAGGACAAGCAGGACAAGAACATCAAGAAGAGAGTTGATGAAGAGGATTGGTGGTGGTTCTAGAAGAACAAGCAGAGGAGGAGCCAATAAAGCCAGTAATGGGATTCAGAGAAGGGTGAGAAGATTGAAGAGTCTTATACCAAACAGTGGTGACAGTAACATGGGTTTGGATGGACTGTTTAGAGAGACAGCTAATTATATATTGTCTTTGCAAACTAGAGTGAGAGTCATGCAGGTCATGGTTAAGGTTTTGACAGGTTCTGGTGATGATGATGATGATGCATGA 411 0.4258 MGVSSHPFSSSLVSLSLDDLEGLNDPSNLWKQKLSVKGRRPPRTSRTRTSRRELMKRIGGGSRRTSRGGANKASNGIQRRVRRLKSLIPNSGDSNMGLDGLFRETANYILSLQTRVRVMQVMVKVLTGSGDDDDDA 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc31559g00002 136 CDD bHLH_AtIBH1_like 66 123 IPR044549 GO:0006355
Stsc31559g00002 136 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 32 126 IPR044660 GO:0006355
Stsc31559g00002 136 MobiDBLite consensus disorder prediction 34 81 - -
Stsc31559g00002 136 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 77 126 IPR036638 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc31559g00002 50 129 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G47270 48.750 1.09e-18 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc31559g00002 - - ccaj:109814433 106.301