Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc31541g00003 ATGATGAGTGCAGGTTTAAGTGTGAGTGCAAGGAATAGTAGGTCTTCTTCTCCTTTCACCCCAAATCAGTGGCAAGAACTTGAACAACAAGCTCTTGTTTTCAAGTACATGGTTACAGGAACCCCAATCCCACCAGATCTCATTTTCTCAATCAAAAGAAGCCTTGACTCCTCAATCTCTTCAAGACTCTTCCCACACCATCCAAGTGGTGCAGTTGGGTATGCATATTTTCAAATGGGTTTTGGCAGAAAAGTAGACCCAGAGCCAGGGAGGTGCAGAAGAACAGATGGCAAGAAATGGAGGTGCTCTAAGGAAGCATATCCAGATTCTAAGTACTGTGAAAGGCACATGCACAGAGGCAGGAACCGTTCAAGAAAGCCTGTGGAAATTTCTTCATCAACTGCTGCAACCACTAACACTAACACAAACAACATTTCTTCATCATCTCAACTCATCAATCATCATCAATCTTCTTCCTCTTCTTATACCATTACCAACAATATGCCTTCATCAGCATCACCATGTTCTTTCAGTTTCAACCCACTGCCTTCATCATCATCTTCTTCTCTGCATCAATCTGAGTCATCACAGCAGCAATACTTCTCTCAATCTTACCAAAACCCCTTCTTTTACACCCAATCAACATCTTCTTGTTCTTCTTCTTCTTCTCAAGATGCCACTACACACCACCTTTTCATGGACTCCGGGTCTTATTCTCATGATGAAAAGGACTATAGGCATATTCATGGAATGAGGGAGGATGTGGATGAAAGATCTTTCTTCCCAGAAGCTTCAGGTTCAGCTAGGAGCTACCTTCATGACTCATATCATCATCATCATCATCATCATCAACAACAACAAAATCTGTCAATGAGTTCCTACAAGAACTACTCATCATCAAATAATTCCCATTTCCAAATCATGAACAATAGTAACAATGATGATCCAAGAAATCAAGAGCAGCATTGCTTTGTTTTGGGGACAGACTTCAAATCAACAAGCAAAGAGAAAGACAACAACACTACTGAGAAAACAACAACAACACAGCAGAGACCTCTTCATCACTTCTTTGGTGAATGGCCACCAAAGAACACTGATTCATGGCTTGATCTTGCTTCCAACAACTCTAGAATACCCTCAGCAGATGAATGA 1152 0.4115 MMSAGLSVSARNSRSSSPFTPNQWQELEQQALVFKYMVTGTPIPPDLIFSIKRSLDSSISSRLFPHHPSGAVGYAYFQMGFGRKVDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEISSSTAATTNTNTNNISSSSQLINHHQSSSSSYTITNNMPSSASPCSFSFNPLPSSSSSSLHQSESSQQQYFSQSYQNPFFYTQSTSSCSSSSSQDATTHHLFMDSGSYSHDEKDYRHIHGMREDVDERSFFPEASGSARSYLHDSYHHHHHHHQQQQNLSMSSYKNYSSSNNSHFQIMNNSNNDDPRNQEQHCFVLGTDFKSTSKEKDNNTTEKTTTTQQRPLHHFFGEWPPKNTDSWLDLASNNSRIPSADE 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc31541g00003 383 MobiDBLite consensus disorder prediction 330 352 - -
Stsc31541g00003 383 Pfam WRC 87 129 IPR014977 -
Stsc31541g00003 383 ProSiteProfiles QLQ domain profile. 18 53 IPR014978 GO:0005524|GO:0005634|GO:0006355
Stsc31541g00003 383 PANTHER GROWTH-REGULATING FACTOR 5 13 222 IPR031137 GO:0005634|GO:0006351|GO:0032502
Stsc31541g00003 383 SMART QLQ_2 17 53 IPR014978 GO:0005524|GO:0005634|GO:0006355
Stsc31541g00003 383 MobiDBLite consensus disorder prediction 127 166 - -
Stsc31541g00003 383 MobiDBLite consensus disorder prediction 1 22 - -
Stsc31541g00003 383 ProSiteProfiles WRC domain profile. 86 130 IPR014977 -
Stsc31541g00003 383 Pfam QLQ 18 51 IPR014978 GO:0005524|GO:0005634|GO:0006355
Stsc31541g00003 383 MobiDBLite consensus disorder prediction 113 166 - -
Stsc31541g00003 383 MobiDBLite consensus disorder prediction 276 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc31541g00003 Stsc-Chr31541 3994 5856 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc31541g00003 1 359 GRF Transcription Factor Family AT3G13960 39.547 6.82e-69 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Stsc31541g00003 WRC 2.1e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc31541g00003 - - ahf:112710413 540.421