Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc31524g00001 ATGGCAAGTGATGCTCGATTGGTTAGCAATTTATTACTTGATTACAAGTACAAGGGTGTGTATGAGGATTCGGAATCGTTGGTTGATGTTGGTGGAGGCACTGGAACTGTTGCAAAGGCTATTGCCAAATCATTACCACAGTTAGAGTGCACTGTATTTGATCTCTCACATGTTGTTGCTGGCTTGGAAGGAAGTGACAACCTTAAATATATTGCAGGGGACATGTTTGAGGTCATTCCTCCATCGGATGCCATTTTGTTGAAGTGGATTTTACATGACTGGAATGACGAAGAATGTTTGAAGATATTGAAAAATTGCAAGGAAGCAATCATGAGTAAAGGCAAAGGAGGGAAGGTTATTATCATAGATATGGTAATAATGGAAGAAGATAAGAAAAGAGGTGATGATGAATCTGTTGAAACACAACTGTTCTTTGACATGCTGATGATGGTGTTGGTCACAGGAAAAGAGAGAAATGAAAAAGAATGGGCCAAATTAATCTTTTCTGCTGGATTTAATAACTATAAAATAACTCCGATTCTTGGATTAAGATCCCTCGTTGAGATATATCCATAG 576 0.3802 MASDARLVSNLLLDYKYKGVYEDSESLVDVGGGTGTVAKAIAKSLPQLECTVFDLSHVVAGLEGSDNLKYIAGDMFEVIPPSDAILLKWILHDWNDEECLKILKNCKEAIMSKGKGGKVIIIDMVIMEEDKKRGDDESVETQLFFDMLMMVLVTGKERNEKEWAKLIFSAGFNNYKITPILGLRSLVEIYP 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc31524g00001 191 Gene3D Vaccinia Virus protein VP39 1 191 IPR029063 -
Stsc31524g00001 191 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 191 IPR016461 GO:0008168
Stsc31524g00001 191 PANTHER O-METHYLTRANSFERASE 1 176 IPR016461 GO:0008168
Stsc31524g00001 191 FunFam O-methyltransferase ZRP4 1 191 - -
Stsc31524g00001 191 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 6 188 IPR029063 -
Stsc31524g00001 191 CDD AdoMet_MTases 27 126 - -
Stsc31524g00001 191 Pfam O-methyltransferase domain 18 173 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc31524g00001 Stsc-Chr31524 1786 2749 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc31524g00001 1 190 Monolignol Biosynthesis Gene Families AT1G77520 37.173 7.12e-36 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc31524g00001 - K16040 aip:107609507 301.597