Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc31517g00002 AACATTCACCTAAATACCCTCTTAACCCAATTTCCAAACTACTATCTACAACATTCATTATTAGGGTATAATAGTAATAATACTACTAATGAACTTCTTGTTCCTCCTTCATGCCTTAGTAGTAACTCAACTACTTCTGATGAAGCTGAAGAGAACCAACTCAACATCATTGATGAGAGGAGGCAGAGAAGGATGATATCGAATCGCGAATCAGCACGGAGATCGAGGATGAGAAAGCAGAAGCACTTGGATGAATTATGGTCAGTGGTTGTGAGGCTCAGAAATGAGAATCACAACCTTATTGATAAACTCAATCACGTTTCCGATGCTCATGAAAGAGTGATACAAGAGAATGCGCGTCTTAAGGAAGAAGTTTCTGATCTTCGCCAAATGCTCGCAGAACTCCAAATTGCAACCACCGCTGCCACCACTTTTTCCGGTGGTAGAGATGAATCCTCAAACAATAACTCATTCAACTCAAGGGAATTACTATGA 495 0.402 NIHLNTLLTQFPNYYLQHSLLGYNSNNTTNELLVPPSCLSSNSTTSDEAEENQLNIIDERRQRRMISNRESARRSRMRKQKHLDELWSVVVRLRNENHNLIDKLNHVSDAHERVIQENARLKEEVSDLRQMLAELQIATTAATTFSGGRDESSNNNSFNSRELL 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc31517g00002 164 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 58 121 IPR004827 GO:0003700|GO:0006355
Stsc31517g00002 164 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 19 142 IPR044521 -
Stsc31517g00002 164 MobiDBLite consensus disorder prediction 144 164 - -
Stsc31517g00002 164 Coils Coil 104 138 - -
Stsc31517g00002 164 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 63 78 IPR004827 GO:0003700|GO:0006355
Stsc31517g00002 164 Pfam bZIP transcription factor 60 110 IPR004827 GO:0003700|GO:0006355
Stsc31517g00002 164 CDD bZIP_plant_GBF1 61 111 IPR045314 GO:0003700|GO:0006355
Stsc31517g00002 164 SMART brlzneu 56 120 IPR004827 GO:0003700|GO:0006355
Stsc31517g00002 164 SUPERFAMILY Leucine zipper domain 60 110 IPR046347 GO:0003700|GO:0006355
Stsc31517g00002 164 Gene3D - 58 114 - -
Stsc31517g00002 164 FunFam BZIP transcription factor 58 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc31517g00002 Stsc-Chr31517 7913 8453 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc31517g00002 9 151 bZIP Transcription Factor Family AT3G30530 55.034 5.13e-45 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc31517g00002 bZIP_1 6.3e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc31517g00002 - - adu:107478924 243.817