Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Stsc31479g00001 | ATGGCGGCAATCACCCTGGAGGAGATCAAGAACGAGACTGTCGATTTGGAGCGAATTCCTATTGATGAAGTGTTCCAGCAACTGAAATGTTCGAGAGAAGGTTTGTCAGGGGCGGAAGGAGACAATCGGCTTCAGATATTTGGCCCAAACAAACTAGAAGAGAAGAAGGAAAGCAAACTCCTCAAGTTTCTCGGGTTCATGTGGAATCCCCTGTCATGGGTCATGGAAGCTGCAGCTATCATGGCTATTGCACTTGCAAATGGTGATGGAAAGCCTCCGGATTGGCAAGATTTCGTTGGTATCGTTTGTTTGTTGTTTATCAACTCCACCATCAGTTTCATTGAAGAAAACAATGCTGGAAATGCTGCTGCGGCTCTTATGGCTGGTCTTGCTCCCAAGACTAAGGTTCTTAGAGATGGAAAATGGTCTGAGCAAGAAGCAGCAATTCTGGTCCCTGGAGACATCATTAGCATCAAACTAGGTGATATCGTTCCTGCTGATGCTCGTCTTCTTGAGGGTGATCCTTTAAAGATTGATCAATCTGCTCTTACCGGAGAGTCCCTTCCGGTCACCAAGAGTCCAGGGGATGAAGTCTTCTCTGGCTCAACTTGTAAACAAGGTGAAATTGAAGCCGTCGTCATTGCAACCGGTGTCCACACATTCTTCGGCAAGGCGGCTCATCTCGTGGATAGCACCAACCAAGTTGGACATTTCCAGAAGGTTCTCACAGCAATTGGAAATTTCTGCATTTGTTCCATTGCTGTTGGTATGGTGGCTGAGATCATAGTCATGTACCCTGTTCAGCACCGCAAATATAGAGATGGAATTGACAACCTGTTGGTCCTCTTGATTGGTGGAATCCCCATTGCTATGCCCACTGTGTTGTCTGTCACAATGGCCATTGGCTCTCACAGGCTCTCTCAGCAGGGTGCTATCACCAAGCGTATGACCGCCATTGAAGAAATGGCCGGCATGGATGTCCTCTGCAGTGACAAGACTGGGACACTCACCCTGAACAAGCTGAGTGTTGACAGGAACTTGATTGAAGTCTTTGCCAAGGGTGTGGACAAGGAACATGTTATCCTTCTTGCTGCAAGGGCTTCCAGGACTGAAAACCAGGATGCAATAGATGCTGCCATCGTTGGAATGCTTGCTGATCCAAAAGAGGCAAGGGCTGGGGTAAGAGAGGTTCACTTCTTGCCATTCAATCCAGTTGACAAGAGAACAGCTTTGACTTACATTGATTCTGAAGGAAATTGGCACAGGGCAAGCAAAGGTGCTCCTGAGCAGATCATTGCCTTGTGTAACCTTAGGGAAGATGCTAAGAAAAAGTGCCATGCTATTATTGACAAGTTCGCAGACAGAGGGCTCCGTTCCCTCGCTGTTGCTAGACAGGAAGTTCCAGAGAAAACAAAGGAAAGTGCCGGTGGTCCATGGCAGTTTGTTGGTTTGTTGCCACTGTTTGATCCCCCAAGACATGACAGTGCTGAGACTATCCGACAAGCTCTTAACCTTGGCGTAAATGTCAAGATGATTACGGGTGATCAACTTGCCATTGCTAAGGAGACCGGACGGAGACTTGGGATGGGAACAAATATGTATCCATCTGCTTCCTTACTTGGTCAAGACAAGGATGCAAGTATTGCTGCACTTCCAGTGGAAGAGCTTATTGAGAAGGCTGATGGATTTGCTGGAGTATTTCCAGAACACAAATATGAAATTGTCAGGAAGTTACAAGAGAGGAAGCACATTTGTGGAATGACCGGAGACGGTGTAAATGATGCTCCTGCCTTAAAGAAGGCTGATATTGGAATTGCTGTTGCTGATGCCACTGATGCGGCAAGAAGTGCTTCTGACATTGTCTTGACTGAGCCAGGATTGAGTGTTATTATTAGTGCTGTCTTAACCAGCAGAGCTATTTTCCAAAGAATGAAGAACTATACGATCTATGCAGTATCTATCACCATCCGTATAGTGTTTGGCTTCATGTTCATTGCACTAATCTGGAAATTCGACTTTTCACCTTTCATGGTTTTGATCATTGCTATTCTAAATGATGGAACAATCATGACAATTTCGAAGGACCGTGTGAAGCCATCTCCCTTGCCCGACAGCTGGAAACTGCGAGAAATATTCGCCACTGGGACTGTTCTTGGAAGTTACTTGGCACTGATGACTGTCATATTCTTCTGGGCAATGAAGGAAACTAGCTTCTTCCCTGACAAATTTGGAGTTAGACACCTGAATCATGATGAAATGATGTCTGCTCTGTATCTACAAGTTAGTATTGTTAGCCAGGCTTTGATCTTTGTGACTCGTTCACGCAGCTGGTCCTTCGTTGAACGCCCCGGATTGTTATTGGTCACTGCTTTTGTTATTGCTCAGCTGATTGCTACAATCATAGCAGTATATGCCGACTGGGGCTTTGCAAAGGTGAAAGGAATTGGTTGGGGTTGGGCTGGAGTCATCTGGCTCTACAGTGTTGTCTTCTATATTCCTCTTGACCTAATGAAGTTCGCCATCCGCTACATCTTGAGTGGCAAGGCCTGGGTAAATCTGCTAGAAAACAAGACTGCCTTCACCACCAAGAAAGACTATGGTAAGGAAGAGAGGGAAGCTCAGTGGGCTCTTGCTCAGAGGACTCTGCATGGTCTTCAACCACCGGAAACTTCTAGTATCTTTAATGAAAAGAGTAGTTACAGGGAACTCTCTGAGATTGCAGAACAAGCCAAGAGAAGAGCCGAAGTTGCAAGGCTTCGTGAGCTTAACACACTAAAGGGACATGTTGAATCAGTGGTGAAGCTAAAAGGTTTGGACATTGATACAATCCAACAGCACTACACTGTGTGA | 2850 | 0.4589 | MAAITLEEIKNETVDLERIPIDEVFQQLKCSREGLSGAEGDNRLQIFGPNKLEEKKESKLLKFLGFMWNPLSWVMEAAAIMAIALANGDGKPPDWQDFVGIVCLLFINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKSPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGMVAEIIVMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDRNLIEVFAKGVDKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSEGNWHRASKGAPEQIIALCNLREDAKKKCHAIIDKFADRGLRSLAVARQEVPEKTKESAGGPWQFVGLLPLFDPPRHDSAETIRQALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLREIFATGTVLGSYLALMTVIFFWAMKETSFFPDKFGVRHLNHDEMMSALYLQVSIVSQALIFVTRSRSWSFVERPGLLLVTAFVIAQLIATIIAVYADWGFAKVKGIGWGWAGVIWLYSVVFYIPLDLMKFAIRYILSGKAWVNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPETSSIFNEKSSYRELSEIAEQAKRRAEVARLRELNTLKGHVESVVKLKGLDIDTIQQHYTV | 949 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Stsc31479g00001 | 949 | Gene3D | - | 898 | 949 | - | - | |
| Stsc31479g00001 | 949 | NCBIfam | HAD-IC family P-type ATPase | 101 | 348 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
| Stsc31479g00001 | 949 | NCBIfam | HAD-IC family P-type ATPase | 563 | 677 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
| Stsc31479g00001 | 949 | SFLD | p-type atpase | 311 | 639 | IPR044492 | - | |
| Stsc31479g00001 | 949 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 15 | 845 | IPR023298 | - | |
| Stsc31479g00001 | 949 | Gene3D | - | 326 | 625 | IPR023214 | - | |
| Stsc31479g00001 | 949 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 17 | 881 | - | - | |
| Stsc31479g00001 | 949 | NCBIfam | plasma-membrane proton-efflux P-type ATPase | 34 | 804 | IPR006534 | GO:0008553|GO:0016020|GO:0120029 | |
| Stsc31479g00001 | 949 | SUPERFAMILY | HAD-like | 325 | 635 | IPR036412 | - | |
| Stsc31479g00001 | 949 | Coils | Coil | 900 | 920 | - | - |
Showing 1 to 10 of 36 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Stsc31479g00001 | K01535 | - | gmx:100816905 | 1738.01 |
Showing 1 to 1 of 1 entries