Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc31475g00002 ATGGCGAAAAAGTATGAAGGATATGCAGTGGGAATCGACCTTGGCACAACATACTCTTGTGTTGGCGTATGGCAGGAGCAACATTGTCGTGTTGAGATCATTCATAATGATCAGGGCAACAGAACAACACCTTCCTCCGTTGCTTTCACTCAGAATCAAAGATTAATTGGAGATGCTGCTAAGAACCAGGCTGCTGCTAACCCAACTAACACTGTCTTTGATGCTAAGAGATTGATTGGTAGAAAATATAGTGATCCGATTGTCAGGAATGATATCCTGATGTGGCCATTTAAGGTCACTGCTGGCAATGATGATAAACCAATGATTGTTGTTACTTACAAGGATCAAGAGAAGCACTTTTCTGCTGAAGAAATCTCATCTATGGTTCTCACTAAGATGCGAGAGATTGCAGAGGCATTCTTAGAGTCACCTGTTCGTAATGCTGTTATTACAGTACCTGCTTATTTCAATGGCTCTCAGCGCAAAGCTACCAGAGATGCTGGCGCCATTGCAGGTCTCAATGTGATGCGAATAATTAGTGAGCCAACCGCTGCTGCTATTGCATATGGCCTTTACAAGAGATTGGATTGCACTAGAGAGCGTAATATCTTCATCTTTGATCTTGGAGGTGGTACTTTTGATGGTAAGGTCTTCCAAGTTAAGGCTACTGCCGGAAACACTCACCTTGGAGGAGAGGATTTTGATAACAGAGTAGTGAGTTACTTTGTTAAGGAATTCAATAGAAAGAACAAGGTTGACATTAGTGGCAATGCCAGAGCCTTAAGGAGATTGAGAACTGCTTGTGAGAAGGCAAAGAGGACTTTATCTTATGCCGTTACTGCCACCATTGAGTTAGATGCTTTCTTTACAGGAATTGACTTCTATTCATCAATCAGTCGTGCTAGATTCGAAGAACTTAATTCAGACCTATTTAGAGAGTGCTTGGAAACGGTAGACCGTTGCCTGACTGATGCAAAAATGGACAAGTCAAGTGTACATGATGTAGTGCTTGTTGGTGGGTCTTCTAGGATTCCCAAAGTGCAGGAGTTGTTGCAAGAATTTTTCAAGGGAAAGGAGCTTTGTAAGAGCATCAATCCTGATGAAGCTGTTGCTTATGGCGCAGCTGTTACTGCTGCTTTGTTGAATGGAAGCACCAAGAGTACTGCCCCTGACTTGGTGCTGCAGGATGTTACTCCTTTGTCTCTTGGAGTACAGACAAGAGGTGATGTAATGACTGTTGTGATTCCAAGGAATACTACCATTCCTGTAAAGAAATCCCAAAATCTCGTCACCGTTATAGATAACCAATTTGAGGTGGTGCACGATATTTATGAAGGTGAGAGGACACGAGCAAGTGATAACAACTTGCTCGGTGAATTTTCACTTTGCGGCATCCCTGCTGCTCCTAAGGGCCATCCTGTTTCGATATGCTTTGATTTAGATGCCGATGGCATCCTATGTGTAACTTCAGAGGAAAAGACCACCGGCAATAAAAACCAGATAACCATAACAAATGATAAAGGAAAATTGTCACAGGAAGAAATCGAAAGGCTCGTTGAGGAAGCCCAGAGATTCAAGATTGAAGATGAGAAGTTTCTTCAGAAAGCTAATGCAATACGCGCTTTGCATGATTATGTTTATGACATGGAGAAAGCCTTAATCGGTTCTAATATTTGTCCTGAGGATAGGAAGAAGCTAAATTCTGCAATTGATAAGGTTAGAACTCTGCTTGATGATGGTAACAAGGAGAACATAGAAATCGATGTGTTCGTGGAGCATCTTAATGAAGCTAAGCTCATTTTTGAGCCCATTAAAGCTAAGACCGATTAA 1830 0.4191 MAKKYEGYAVGIDLGTTYSCVGVWQEQHCRVEIIHNDQGNRTTPSSVAFTQNQRLIGDAAKNQAAANPTNTVFDAKRLIGRKYSDPIVRNDILMWPFKVTAGNDDKPMIVVTYKDQEKHFSAEEISSMVLTKMREIAEAFLESPVRNAVITVPAYFNGSQRKATRDAGAIAGLNVMRIISEPTAAAIAYGLYKRLDCTRERNIFIFDLGGGTFDGKVFQVKATAGNTHLGGEDFDNRVVSYFVKEFNRKNKVDISGNARALRRLRTACEKAKRTLSYAVTATIELDAFFTGIDFYSSISRARFEELNSDLFRECLETVDRCLTDAKMDKSSVHDVVLVGGSSRIPKVQELLQEFFKGKELCKSINPDEAVAYGAAVTAALLNGSTKSTAPDLVLQDVTPLSLGVQTRGDVMTVVIPRNTTIPVKKSQNLVTVIDNQFEVVHDIYEGERTRASDNNLLGEFSLCGIPAAPKGHPVSICFDLDADGILCVTSEEKTTGNKNQITITNDKGKLSQEEIERLVEEAQRFKIEDEKFLQKANAIRALHDYVYDMEKALIGSNICPEDRKKLNSAIDKVRTLLDDGNKENIEIDVFVEHLNEAKLIFEPIKAKTD 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc31475g00002 609 SUPERFAMILY Actin-like ATPase domain 8 193 IPR043129 -
Stsc31475g00002 609 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Stsc31475g00002 609 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 387 538 IPR029047 -
Stsc31475g00002 609 Gene3D - 10 379 - -
Stsc31475g00002 609 Pfam Hsp70 protein 9 588 IPR013126 GO:0005524|GO:0140662
Stsc31475g00002 609 FunFam heat shock 70 kDa protein-like 73 128 - -
Stsc31475g00002 609 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 510 607 IPR029048 -
Stsc31475g00002 609 Gene3D Actin; Chain A, domain 4 230 313 - -
Stsc31475g00002 609 Gene3D - 194 361 - -
Stsc31475g00002 609 FunFam Heat shock 70 kDa 230 313 - -
Stsc31475g00002 609 PRINTS 70kDa heat shock protein signature 38 50 - -
Stsc31475g00002 609 PRINTS 70kDa heat shock protein signature 391 410 - -
Stsc31475g00002 609 PRINTS 70kDa heat shock protein signature 332 348 - -
Stsc31475g00002 609 PRINTS 70kDa heat shock protein signature 364 384 - -
Stsc31475g00002 609 PRINTS 70kDa heat shock protein signature 60 68 - -
Stsc31475g00002 609 PRINTS 70kDa heat shock protein signature 471 487 - -
Stsc31475g00002 609 PRINTS 70kDa heat shock protein signature 148 168 - -
Stsc31475g00002 609 PRINTS 70kDa heat shock protein signature 211 221 - -
Stsc31475g00002 609 PRINTS 70kDa heat shock protein signature 8 21 - -
Stsc31475g00002 609 ProSitePatterns Heat shock hsp70 proteins family signature 3. 335 349 IPR018181 -
Stsc31475g00002 609 SUPERFAMILY Actin-like ATPase domain 198 381 IPR043129 -
Stsc31475g00002 609 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 390 538 IPR029047 -
Stsc31475g00002 609 PANTHER HEAT SHOCK PROTEIN 70KDA 9 571 IPR013126 GO:0005524|GO:0140662
Stsc31475g00002 609 Gene3D - 539 608 IPR029048 -
Stsc31475g00002 609 FunFam Heat shock 70 kDa protein 385 539 - -
Stsc31475g00002 609 Gene3D - 73 128 - -
Stsc31475g00002 609 FunFam Heat shock protein 70 10 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc31475g00002 Stsc-Chr31475 10253 12971 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc31475g00002 1 607 Calmodulin-binding Proteins AT3G12580 66.074 0.0 820
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc31475g00002 K03283 - gmx:102667578 840.106