Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc31466g00001 CCTCACAACATTCTTTTGGATGACAACTTCAATCCAAAAGTCTCTGATTTTGGACTTGCAAGGCTGTATCCCACTGATGCAAGCATTGTGTCTCTGACCGCAGCAAGAGGAACCATAGGCTACATGGCTCCTGAGCTCTTTTACAGAAACGTCGGCGCAATCTCATACAAAGCCGATGTTTATAGCTTTGGGATGTTGTTGATGGAAATGGCCAGCAGAAGGAAGAATTTGAATGCTATGACTGAAAATTCCAGCAAAATATATTTTCCCTTTTGGGTTTATGATCAATTGCATGATGGGAGGGAAATCACAATAGAAAATGACACAGATGAAGAGATGAAGTTGGCAAAGAAAATGATGATTGTAGCATTGTGGTGCATACAAACAAAGCCTAATGATAGGCCTTCAATGAAGAGAGTAGTGGAGATGCTGACACAAGATGATGAGTTAGAAATGCCTCCAAAGCCATACTTCTATCCACTTGATGAAGCTGCAGATGGAGTTGGAGAAGATAACAGTTCAAGCCTATCCTCTGATATGTCATCAGTTACTGGTTCCAACTAA 564 0.4113 PHNILLDDNFNPKVSDFGLARLYPTDASIVSLTAARGTIGYMAPELFYRNVGAISYKADVYSFGMLLMEMASRRKNLNAMTENSSKIYFPFWVYDQLHDGREITIENDTDEEMKLAKKMMIVALWCIQTKPNDRPSMKRVVEMLTQDDELEMPPKPYFYPLDEAADGVGEDNSSSLSSDMSSVTGSN 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc31466g00001 187 Gene3D Transferase(Phosphotransferase) domain 1 1 157 - -
Stsc31466g00001 187 Pfam Protein kinase domain 1 142 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc31466g00001 187 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 170 IPR045874 GO:0004672
Stsc31466g00001 187 MobiDBLite consensus disorder prediction 170 187 - -
Stsc31466g00001 187 SUPERFAMILY Protein kinase-like (PK-like) 1 144 IPR011009 -
Stsc31466g00001 187 MobiDBLite consensus disorder prediction 151 187 - -
Stsc31466g00001 187 ProSiteProfiles Protein kinase domain profile. 1 158 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc31466g00001 Stsc-Chr31466 27 590 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc31466g00001 1 156 Receptor kinase-like Gene Family AT5G39030 53.416 4.60e-50 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Stsc31466g00001 Pkinase 2.1e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc31466g00001 - - aip:107607706 322.013