Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc3145g00001 ATGGAGCAGTCGTTACTCGACGGCATAATCAATCGCCTCCTCGAAGTTCGTGGCCGCCCCGGCAAGCAGGTTCAGCTCTCCGAGTCCGAGATCCGCCAGCTCTGCCTCGTTTCCAGAGACATTTTCTTGCAACAACCTAATTTATTAGAACTCCAAGCTCCTATTAAGATTTGCGGGGATGTACATGGCCAATACTCCGATCTTCTACGGCTTTTCGAGTACGGCGGATTACCGCCCGAGGCTAACTACTTGTTTTTGGGGGATTACGTGGATCGAGGCAAGCAGAGTTTAGAAACTATTTGCCTTCTTCTTGCTTATAAAATCAAATATCCTGAGAATTTCTTCCTCTTGAGGGGAAATCACGAGTGTGCTTCTATCAATCGGATATACGGTTTTTATGATGAGTGTAAGAGGAGGTTTAATGTTAGTTTATGGAAGACTTTCACTGAATGCTTCAATTGCCTCCCCGTCGCCGCCCTTATTGATGATAAGATTTTGTGTATGCACGGTGGACTCTCTCCTGAGTTGCATGATTTGGATCAGATTAGGAATCTTCACCGCCCTACTGATGTGCCTGACACTGGTTTGCTCTGTGATCTTCTTTGGTCTGACCCTGGCAAAGATGTTCAAGGTTGGGGCATGAATGACAGGGGAGTTTCTTATACCTTTGGTGCTGATAAAGTCTCCGAGTTTCTCGAGAAACATGATCTTGATCTTATATGCCGCGCTCATCAGGTTGTCGAGGACGGATATGAGTTCTTTGCCAATCGGCAGCTTGTGACGATATTTTCAGCACCTAATTATTGTGGGGAGTTTGACAATGCTGGTGCCATGATGAGTGTAGATGAAACACTAATGTGCTCGTTCCAAATCTTAAAGCCTGCTGATAGGAAGCCAAAGCTCAATTTCGGAAGTAC 917 0.4569 MEQSLLDGIINRLLEVRGRPGKQVQLSESEIRQLCLVSRDIFLQQPNLLELQAPIKICGDVHGQYSDLLRLFEYGGLPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVSLWKTFTECFNCLPVAALIDDKILCMHGGLSPELHDLDQIRNLHRPTDVPDTGLLCDLLWSDPGKDVQGWGMNDRGVSYTFGADKVSEFLEKHDLDLICRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADRKPKLNFGST 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc3145g00001 306 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 9 298 - -
Stsc3145g00001 306 Pfam Calcineurin-like phosphoesterase 54 246 IPR004843 GO:0016787
Stsc3145g00001 306 ProSitePatterns Serine/threonine specific protein phosphatases signature. 117 122 IPR006186 GO:0016787
Stsc3145g00001 306 Pfam Serine-threonine protein phosphatase N-terminal domain 6 52 IPR031675 -
Stsc3145g00001 306 Gene3D - 1 305 IPR029052 -
Stsc3145g00001 306 SMART pp2a_7 26 296 IPR006186 GO:0016787
Stsc3145g00001 306 PRINTS Serine/threonine phosphatase family signature 83 110 IPR006186 GO:0016787
Stsc3145g00001 306 PRINTS Serine/threonine phosphatase family signature 236 256 IPR006186 GO:0016787
Stsc3145g00001 306 PRINTS Serine/threonine phosphatase family signature 54 81 IPR006186 GO:0016787
Stsc3145g00001 306 PRINTS Serine/threonine phosphatase family signature 258 274 IPR006186 GO:0016787
Stsc3145g00001 306 PRINTS Serine/threonine phosphatase family signature 150 176 IPR006186 GO:0016787
Stsc3145g00001 306 PRINTS Serine/threonine phosphatase family signature 179 206 IPR006186 GO:0016787
Stsc3145g00001 306 PRINTS Serine/threonine phosphatase family signature 116 140 IPR006186 GO:0016787
Stsc3145g00001 306 SUPERFAMILY Metallo-dependent phosphatases 18 299 IPR029052 -
Stsc3145g00001 306 CDD MPP_PP1_PPKL 6 294 - -
Stsc3145g00001 306 FunFam Serine/threonine-protein phosphatase 51 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc3145g00001 Stsc-Chr3145 3491 4912 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc3145g00001 33 242 Calmodulin-binding Proteins AT5G63870 30.279 6.19e-27 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc3145g00001 K06269 - gmx:100799218 601.668