Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc31451g00003 ATGGGGTGTTTACATTCGAAAACCGCTCATCTTCAATCTCCTGAAGACCCTCCCACTGACTTACCAGACCCAAACAAGCCCGATCCAGGTGATGGGGTTGGTGGTGATGAAAGTGGAGTGAGTGAGGTTCCGGCATTCAAAGAATATAGCTTAAGTGAACTGAGAAGAGCAACAAATGAGTTCAACGCGAAGAACATAGTGTCAGAGAGTGGTGAGAAAGCTCCAAACGTTGTGTACAAAGGGAAGCTTGAAAACAACCGCTATGTTGCTGTGAAGCGCTTCTCCAAACTTTCTTGGCCGGATGCTCAACAGTTCATGGTAGAGGCTGCTGGAGTTGGGAAAGTGAGGCACAAGAGACTGGTGAATCTAATTGGTTGTTGCGCTGAAGGAGATGAGCGGCTCTTGGTAGCCGAGTTCATGCCGAATGATACTTTGTCAAAGCATCTCTTTCATTGGGACAAGCAACCATTACCGTGGGAAATGCGCGTTAGAGTTGCATACCATGTTGCTCAGGCACTGGATCATTGTAGCAGCGAAAACCGGAAAATATACCATGATCTGAATGCATATAGGATTCTCTTCGACGAGGATGGTGATCCCCGTTTATCTAGTTTCGGGCTTATGAAAAATAGTCGAGATGGAAAAAGCTACAGTACTAACTTAGCATATACTCCACCTGAATTTTTGCGAACAGGTAGGATAATCCCTGAGAGTGTGATTTACAGTTATGGGACTGTTCTTCTGGATCTATTGAGCGGCAAGCATATTCCTCCGAGTCATGCACTTGACCTAATTAGAGGGAAAAATGTATTGATGTTGATGGACTCGTCCCTCGAAGGGCAATATGCAAATGATGATGCTACAAAGTTGGTTGAGCTTGCTTCAAAGTGTCTTCAGTTCGAGGCTAGAGAACGACCCGATATCAATTTTCTTCTTACTGCAGTTACACCCCTTCAGAAGCAGAAAGAGGTAGCATCACATGTGTTAATGGGCCTTACGGTAAATAACACACCGGTGCTTCCGACCATACTTTCTCCACTCGGAAAGGCTTGTGCGAGGATGGATCTTACTGCTGTGCATGATATATTGTTAAAAACCGGTTATAAAGATGAAGAAGGTGCAGAAAATGAGGTGTGTTAG 1140 0.4482 MGCLHSKTAHLQSPEDPPTDLPDPNKPDPGDGVGGDESGVSEVPAFKEYSLSELRRATNEFNAKNIVSESGEKAPNVVYKGKLENNRYVAVKRFSKLSWPDAQQFMVEAAGVGKVRHKRLVNLIGCCAEGDERLLVAEFMPNDTLSKHLFHWDKQPLPWEMRVRVAYHVAQALDHCSSENRKIYHDLNAYRILFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTPPEFLRTGRIIPESVIYSYGTVLLDLLSGKHIPPSHALDLIRGKNVLMLMDSSLEGQYANDDATKLVELASKCLQFEARERPDINFLLTAVTPLQKQKEVASHVLMGLTVNNTPVLPTILSPLGKACARMDLTAVHDILLKTGYKDEEGAENEVC 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc31451g00003 379 Gene3D Transferase(Phosphotransferase) domain 1 141 333 - -
Stsc31451g00003 379 SUPERFAMILY Protein kinase-like (PK-like) 41 316 IPR011009 -
Stsc31451g00003 379 Gene3D Phosphorylase Kinase; domain 1 36 139 - -
Stsc31451g00003 379 Pfam Protein tyrosine and serine/threonine kinase 77 312 IPR001245 GO:0004672|GO:0006468
Stsc31451g00003 379 FunFam probable serine/threonine-protein kinase At5g41260 141 332 - -
Stsc31451g00003 379 MobiDBLite consensus disorder prediction 1 42 - -
Stsc31451g00003 379 FunFam probable serine/threonine-protein kinase At4g35230 36 139 - -
Stsc31451g00003 379 ProSiteProfiles Protein kinase domain profile. 64 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc31451g00003 379 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 37 378 IPR045845 GO:0004672|GO:0009742
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc31451g00003 Stsc-Chr31451 10053 15347 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc31451g00003 14 315 Glycoside Hydrolase AT3G07070 34.347 1.04e-42 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Stsc31451g00003 PK_Tyr_Ser-Thr 4.8e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc31451g00003 K14500 - gmx:100793576 664.455