Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc31451g00002 ATGGGGTGTTTACATTCGAAAACCGCTCATCTTCAATCTCCTGAAGACCCTCCCACTGACTTACCAGACCCAAACAAGCCCGATCCAGGTGATGGGGTTGGTGGTGATGAAAGTGGAGTGAGTGAGGTTCCGGCATTCAAAGAATATAGCTTAAGTGAACTGAGAAGAGCAACAAATGAGTTCAACGCGAAGAACATAGTGTCAGAGAGTGGTGAGAAAGCTCCAAACGTTGTGTACAAAGGGAAGCTTGAAAACAACCGCTATGTTGCTGTGAAGCGCTTCTCCAAACTTTCTTGGCCGGATGCTCAACAGTTCATGGTAGAGGCTGCTGGAGTTGGGAAAGTGAGGCACAAGAGACTGGTGAATCTAATTGGTTGTTGCGCTGAAGGAGATGAGCGGCTCTTGGTAGCCGAGTTCATGCCGAATGATACTTTGTCAAAGCATCTCTTTCATTGGGACAAGCAACCATTACCGTGGGAAATGCGCGTTAGAGTTGCATACCATGTTGCTCAGGCACTGGATCATTGTAGCAGCGAAAACCGGAAAATATACCATGATCTGAATGCATATAGGATTCTCTTCGACGAGGATGGTGATCCCCGTTTATCTAGTTTCGGGCTTATGAAAAATAGTCGAGATGGAAAAAGCTACAGTACTAACTTAGCATATACTCCACCTGAATTTTTGCGAACAGGTAGGATAATCCCTGAGAGTGTGATTTACAGTTATGGGACTGTTCTTCTGGATCTATTGAGCGGCAAGCATATTCCTCCGAGTCATGCACTTGACCTAATTAGAGGGAAAAATGTATTGATGTTGATGGACTCGTCCCTCGAAGGGCAATATGCAAATGATGATGCTACAAAGTTGGTTGAGCTTGCTTCAAAGTGTCTTCAGTTCGAGGCTAGAGAACGACCCGATATCAATTTTCTTCTTACTGCAGTTACACCCCTTCAGAAGCAGAAAGAGGTAGCATCACATGTGTTAATGGGCCTTACGGTAAATAACACACCGGTGCTTCCGACCATACTTTCTCCACTCGGAAAGGCTTGTGCGAGGATGGATCTTACTGCTGTGCATGATATATTGTTAAAAACCGGTTATAAAGATGAAGAAGGTGCAGAAAATGAGCTTTCTTTCCAAGAGTGGACGCAACAAGTGCAAGATATATTGAATACGAAAAAGTTTGGGGATATTGCATTTAGAGACAAGGACTTCAAAAATGCAATTGAGTATTATTCTAAGTTGGTGGTTATGATGTCGGTTCCTTCCGCAACCGTCTTTGCAAGGAGATCCTTTTCCTATTTAATGAATGATCAGGCCGAACTTGCATTACGCGATGCCATGCAGGCTCAGGTATGCATAAGCGATTGGCCGACCGCATTCTACCTGCAGGCTCTCGCCCTATCAAAGCTGGGAATGGACACAGATGCTCAGGACATGCTTAATGACGGGGCAGCCTTTGAAGCGAAGAGGTCTAACAGTTGGCGTGGCTAG 1497 0.4509 MGCLHSKTAHLQSPEDPPTDLPDPNKPDPGDGVGGDESGVSEVPAFKEYSLSELRRATNEFNAKNIVSESGEKAPNVVYKGKLENNRYVAVKRFSKLSWPDAQQFMVEAAGVGKVRHKRLVNLIGCCAEGDERLLVAEFMPNDTLSKHLFHWDKQPLPWEMRVRVAYHVAQALDHCSSENRKIYHDLNAYRILFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTPPEFLRTGRIIPESVIYSYGTVLLDLLSGKHIPPSHALDLIRGKNVLMLMDSSLEGQYANDDATKLVELASKCLQFEARERPDINFLLTAVTPLQKQKEVASHVLMGLTVNNTPVLPTILSPLGKACARMDLTAVHDILLKTGYKDEEGAENELSFQEWTQQVQDILNTKKFGDIAFRDKDFKNAIEYYSKLVVMMSVPSATVFARRSFSYLMNDQAELALRDAMQAQVCISDWPTAFYLQALALSKLGMDTDAQDMLNDGAAFEAKRSNSWRG 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc31451g00002 498 FunFam probable serine/threonine-protein kinase At4g35230 388 497 - -
Stsc31451g00002 498 Pfam Protein tyrosine and serine/threonine kinase 77 312 IPR001245 GO:0004672|GO:0006468
Stsc31451g00002 498 Gene3D Tetratricopeptide repeat domain 388 497 IPR011990 GO:0005515
Stsc31451g00002 498 SUPERFAMILY TPR-like 389 487 IPR011990 GO:0005515
Stsc31451g00002 498 FunFam probable serine/threonine-protein kinase At5g41260 141 332 - -
Stsc31451g00002 498 Gene3D Phosphorylase Kinase; domain 1 36 139 - -
Stsc31451g00002 498 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 37 493 IPR045845 GO:0004672|GO:0009742
Stsc31451g00002 498 MobiDBLite consensus disorder prediction 1 42 - -
Stsc31451g00002 498 SUPERFAMILY Protein kinase-like (PK-like) 41 316 IPR011009 -
Stsc31451g00002 498 FunFam probable serine/threonine-protein kinase At4g35230 36 139 - -
Stsc31451g00002 498 Gene3D Transferase(Phosphotransferase) domain 1 141 333 - -
Stsc31451g00002 498 ProSiteProfiles Protein kinase domain profile. 64 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc31451g00002 Stsc-Chr31451 10053 15657 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc31451g00002 45 315 Glycoside Hydrolase AT3G07070 35.034 1.54e-41 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Stsc31451g00002 PK_Tyr_Ser-Thr 9.9e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc31451g00002 K14500 - gmx:100793576 896.73