Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc31442g00002 ATGCCTCATGTCTCAACGAAAGACACAATTGTTGCCAATTACTTCATCCCAAAAGGTAGCCATGTTATTCTTAGAAGACAAGGGATTGGAACAAATCCAAAGGTTTGGGATGAGCCATTGAAATTCAAACCCGAAAGACATTTGAAGAAAGATGGATCTAATTTGAATTTACTTGAACCAAATTTAAGGTTAATTACATTTAGCGCAGGAAGGCGTAGTTGCCCTGGAGTGACACTTGGTACTACAATGACTGTTATGTTATTTGCAAGGCTGGTTCATGGATTTACTTGGAGTGCACCATCCACTGAGCCTTTCATTGATCTTTCGGAATGTCCAGAAGACACTTCAAAAGCTAAGCCACTTATGGCATTGGCTAAGCCAAGATTACCACCGGAGCAAACCGTGGCACCTTCGCCAAATGTTCCGGCAACTCCATCGTCATCAGCAGCCGCAACTGAGGGTGCCCAATCTCCCACAACATCCTCTCGTCATGGAGATGGGAAGAAACAACCTGAGGAAAAGGAGAAGATGCCTATCACCCCTTCGCCACCGGAGTTCCTGGTAAACAATGGTGTCGCTCCGTTGACGGAGGACGAATACGTCAAAGCTCCAAAACCTTCGATTGAATCATCAAAGATGTGGCAAAGCCAGATACTTCTACCTTTTAAAGTAGATGATGTGTTATATTCTTTCCTTGGTCCAATTGCTTCTAGGGAACAACTAGCTTCGGTCTCGTCATTTTTTCCATCTCCTGCCGAGGGTGTCAGCTTCAACTTTTGGTGCCCTGCCCCCAATAATTTCCATTTTCCTTGTGGCATAATGGGGCATACTCTCTTCGACATTGCCCATATCGCAAGCTTACCAGCTAATGGCGAAAGTATCTCCTGGGATGATAAAGTCGACCTGTCGGACTATTCAGGGGTCGATTATTCAGCTACCTCCTATTCCGCATTTGTCAAGAATAATCAAGGTGAAGAGGGTTACCCAATTACTCCTGTCGAGTATGTGGTGTTTCTTACCTTTTGGCTAAATGCCTTCATTTTCTAG 1047 0.4451 MPHVSTKDTIVANYFIPKGSHVILRRQGIGTNPKVWDEPLKFKPERHLKKDGSNLNLLEPNLRLITFSAGRRSCPGVTLGTTMTVMLFARLVHGFTWSAPSTEPFIDLSECPEDTSKAKPLMALAKPRLPPEQTVAPSPNVPATPSSSAAATEGAQSPTTSSRHGDGKKQPEEKEKMPITPSPPEFLVNNGVAPLTEDEYVKAPKPSIESSKMWQSQILLPFKVDDVLYSFLGPIASREQLASVSSFFPSPAEGVSFNFWCPAPNNFHFPCGIMGHTLFDIAHIASLPANGESISWDDKVDLSDYSGVDYSATSYSAFVKNNQGEEGYPITPVEYVVFLTFWLNAFIF 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc31442g00002 348 MobiDBLite consensus disorder prediction 130 187 - -
Stsc31442g00002 348 Gene3D Cytochrome P450 1 135 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31442g00002 348 SUPERFAMILY Cytochrome P450 1 128 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31442g00002 348 Pfam Cytochrome P450 2 103 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31442g00002 348 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 67 76 IPR017972 GO:0005506|GO:0016705
Stsc31442g00002 348 MobiDBLite consensus disorder prediction 139 164 - -
Stsc31442g00002 348 MobiDBLite consensus disorder prediction 165 179 - -
Stsc31442g00002 348 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 1 133 - -
Stsc31442g00002 348 PRINTS E-class P450 group I signature 74 97 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31442g00002 348 PRINTS E-class P450 group I signature 64 74 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31442g00002 348 PRINTS E-class P450 group I signature 25 49 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc31442g00002 Stsc-Chr31442 12527 15279 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc31442g00002 1 131 Cytochrome P450 AT5G35920 54.962 2.86e-44 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc31442g00002 - - ahf:112723966 212.616