Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc31442g00001 ATGAAATCTTCTACTAACATCATCTCTCATCCAATTTCACTAGCAATTTTGTACCTCTTACCCTTGCTATTTTGCATCATACCCCTCTACATCAAAATCCTCAAACACAGTGATTTAAACAAGAAATCAAAGAAGCCTAGGCTGCCACCAGGTCCCAAACCATGGCCTATAGTTGGTAGCCTCCCTCAAATGCTTGCTAACAAATCCACATTCAGATGGATACAAAACATCATGAATGATTTCGACACCGAAATTACATGCATCCAATTAGGTAATATCCATGTCATCCCGGTGACAAGCCCTTCTATTGCACAAGAGATTTTAACGAAGCAGGATGCGATTTTCGCATCGAGGCCATGGAATTGGTCCAATGAGCATGTCTCACAGGGCTACCTAACCACAGCTATAACACCGTTCGGAGAACAATGGAAGAAGATGAAGAGAGTCATTGCAACAGAATTGGTGTCTCCGCATCGACTTCAATGGCTACATGAAAAAAGGGTGGAAGAAGCCGACAACCTTGTTAGGTATGTGTACAACCAATGCAAAAATGGTAGTGCCCGAGTGAATATAAGGCTTGCTGGGCAACACTATGGTGGAAACTTGGTTAGGAGGTTGTTCTTCAATAAGAGGTACTTTGGTAATGGTAGACAAGATGGAGGACCAGGTGCTGAAGAATTGGAACATGTTGAAGCATTGTTGAATGTGCTAAAGTATCTTTTTGCATTTTCTATTTCTGATTATGTTCCATTATTGAGGGAGTTTGATTTAGATGGTCAAAAAGAAGCAATGAAGAAGGCTACGAATACCATAAGGAAGTACCATGATCCCATCATTGAGGAAAGGATTCATCAATGGAAGAGTGGGACAAGGACACATCAAGAGGATTGGCTTGACATTCCTGTCTCTTTGAAAGATGCCAACAATAATCCACTTTTGACTATGGAAGAGATTAAAGCTCAGATTATCGAACTTATGATTGCAACAATTGACAATCCATACAATAACGTTGAATGGATACTTTCTGAATTGCTAAATCAACCTGAGCTACTACAAAAGGCAGTTGAAGAATTAGATAATGTGGTGGGAAGAAAAAAACAAGTCCAAGAGTCAGATATTCCAAAACTCAACTATGTTAAAGCATGCGTAAGAGAAGGTTTTCGACTTCATCCAATTGTAGACTTCATCATTCCTCATGTCTCAGTGAAAGACACAATTATTGCCAATTACTTCATCCCAAAGGGTAGCCATGTTCTTATTAGAAGACAAGGTATTGGCCAAAATCCAAGAGTTTGGGATGAGCCATTGAAATTCAAACCCGAAAGACATTTGAAGAAAGATGGGTCTAATTTGAATTTAATTGAACTAAATTTAAGGTTAATTACATTTAGCACAGGAAGGCGTAGTTGCCCTGGAGTGACACTTGGTACTACAATGACTGTTATGTTATTTGCAAGGCTGGTTCATGGATTTACTTGGTGTGCACCATCCACTGAGCCTATCATTGATCTTTCAGAATGTGAAGGGGACACTTCAAAAGCTAAGCCACTTATAGCATTGGGTAAGCCTAGATTACCGCTGGAGGTTTATTTCAATTAA 1599 0.3959 MKSSTNIISHPISLAILYLLPLLFCIIPLYIKILKHSDLNKKSKKPRLPPGPKPWPIVGSLPQMLANKSTFRWIQNIMNDFDTEITCIQLGNIHVIPVTSPSIAQEILTKQDAIFASRPWNWSNEHVSQGYLTTAITPFGEQWKKMKRVIATELVSPHRLQWLHEKRVEEADNLVRYVYNQCKNGSARVNIRLAGQHYGGNLVRRLFFNKRYFGNGRQDGGPGAEELEHVEALLNVLKYLFAFSISDYVPLLREFDLDGQKEAMKKATNTIRKYHDPIIEERIHQWKSGTRTHQEDWLDIPVSLKDANNNPLLTMEEIKAQIIELMIATIDNPYNNVEWILSELLNQPELLQKAVEELDNVVGRKKQVQESDIPKLNYVKACVREGFRLHPIVDFIIPHVSVKDTIIANYFIPKGSHVLIRRQGIGQNPRVWDEPLKFKPERHLKKDGSNLNLIELNLRLITFSTGRRSCPGVTLGTTMTVMLFARLVHGFTWCAPSTEPIIDLSECEGDTSKAKPLIALGKPRLPLEVYFN 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc31442g00001 532 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 16 530 - -
Stsc31442g00001 532 SUPERFAMILY Cytochrome P450 49 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31442g00001 532 Coils Coil 351 371 - -
Stsc31442g00001 532 Gene3D Cytochrome P450 34 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31442g00001 532 PRINTS E-class P450 group I signature 421 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31442g00001 532 PRINTS E-class P450 group I signature 380 398 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31442g00001 532 PRINTS E-class P450 group I signature 470 493 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31442g00001 532 PRINTS E-class P450 group I signature 198 216 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31442g00001 532 PRINTS E-class P450 group I signature 337 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31442g00001 532 PRINTS E-class P450 group I signature 460 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31442g00001 532 PRINTS E-class P450 group I signature 103 124 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31442g00001 532 Pfam Cytochrome P450 49 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31442g00001 532 FunFam Cytochrome P450 9 41 528 - -
Stsc31442g00001 532 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 463 472 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc31442g00001 Stsc-Chr31442 4325 7236 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc31442g00001 5 530 Cytochrome P450 AT4G39950 50.758 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc31442g00001 - K12153 gmx:100809902 652.129