Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc31432g00001 ATGGGCTCAAGCTGGTGGAATGAGGTATGGCTGCTGCTCCTTGCTCTTGTTTGGATCCTTTGTGAGAGTGCAGCAGATGCAGCGACGCAACCCAACTCAAATTGCAGTACACAGTGTGGCTCCCTGGAAATTCCGTTCCCATTCGGCACAAGCGAGAGTTGTTACCTGGACTCCTCCTTTCTCATCTCTTGCAACCACACTTCTTCGGGCCCCACCCCGTACCTGACTACCGGCAACATAACCGTACTCAACATCTCGCTGGACGGCGAGATGCGCATTTTAGCAGCAGTCGCTACAGGCTGCTACGACGGCAACGGCACGCGAATTAACGCAACCAGTAAGAGTTGGCATTACAGTTTGTCAAGAAACCACCACTACTTGAGCGTTTCATCGAGTCGAAACAAGTTAACAGCTGTTGGTTGCAACACAGTTGGAGAAATTATAGGGTTTGATGATACAACGGGATTAAATTACACAACGGGGTGCTTGTCTACGTGCCTCAGAATCAATGATACAACTAATGGGGTGTGCAACGGTGCTGGTTGTTGCCAGAGTCCCATACCCGCACAAGGACGATTATCGGGGATTTTATATGCTTCTCTTAAGGGACTCGACGATAGCAACTATGGATTCGGCTTCGACCCCTGCGGTTATGCCTTTGTGGCGGAGGACGGAGCCTACAGCTTCTCCTCCGCAGACCTTACCAACTTCCGCCAACAAAGGCTTCCTGTGGTGTTGGATTGGAGTGTGGGGAACCTGTCATGCGAAGAAGCGAAGAAGAATGCTTCAAATTATGCGTGTAAAGCTGAGAACAGTGAATGTTACAATAGTGGACTTGGTTACCTTTGCAACTGCTCTACTGGTTTCCGGGGAAATCCTTATCTCCTTGGTGATTGCCAGCAAGATATTGATGAATGCATGGAGAAGGAATTAAACGATTGCTACAGTGGGGCAATATGCAAGAACTTACATGGTAGTTATACCTGTACATGTCCAAAAGGTTTTGAAGGAGATGGGAGAGAAAATGGAACAAAGTGCAGTCGCGTTAGTGTGGGTGTGATAGCATTACTTGTGATAAGATTTTACGTGTATTGGAAAATGAAGGAAAAGAGGCTAGATAAACTTAAGGAACAGTTTTTCCAACAAAACGGTGGATTCATCCTACTAGAACAGATTTCAAGACATAGAGGCTCAATAGAAACAGCCAAAGTCTTCACTGTGGAAGAATTAAAGAAGGCCACCAACAACTTTGATGAAGCCAAGATCTTAGGCAAAGGGGGTCAAGGAACAGTTTATAAAGGATTACTATCAGACAATAGAACCGTTGCAATTAAAAGATCCAAAATCAGTGGCTCAACCCAAGTTGAGCAATTTATCAATGAAGTTGTGTTGCTTTCCCAAATCAACCATAGAAATGTGGTTAGACTCTTAGGTTGTTGCTTAGAGACACAAGTTCCATTACTTGTCTATGAGTTCATCCCCAATGGTACCATTTTTGAACATCTTCATGATCATAACCAATCTTTGAAACTTACTTGGGGAACAAGATTGAGAATCGCAATAGAAACTGCTGGGGCCTTAGCATACTTGCATTCTGCTACTTATATGCCGATCATACATAGAGACATCAAAACTACCAATATTCTACTTGATTCTCATCTCACGGCAAAGATTTCTGATTTCGGAGCTTCAAAGATTGTTCCCCTTGATCAAACTGAATTAACCACTTTGGTGCAGGGGACACTAGGGTATCTTGACCCTGAATACATGCACACCAGCCAGTTAACTGAGAAAAGCGATGTTTATAGCTTTGGAGTCATCTTAGCAGAGCTGCTCACCGGAAAGAAGGCAGTCTCTTTCGCTGACCCGGAGGTTAGAAACCTTGCAGCATACTTTGTTTCTTCAATGGAAGAAGGGCGGTTACTTGAGATTGTGGACCAACATATCATAAATGAGGTAAAGGTTGAGCACCTTGTGGAATTTGCCAATGTTGCAAAACAGTGTTTGAGAGTGAAGAGGGAAGAAAGGCCTACCATGAAAGAAGTTGCATCAGAACTTGAGGGGCTTAGAGAAGCAGTTGGAGAGAAACACCGATGGGAAAGTGACAAATCATCTTCTGAAGTTACTAAAAGCTTGTTAAAAGCATCATCATCCTCTGTCTTTGATGTTCAAAGTTCTAAGTTTGATAGCATAAGTCAGGTTTCTATGTCTCTGGGCGGTGGAAGATGA 2229 0.4415 MGSSWWNEVWLLLLALVWILCESAADAATQPNSNCSTQCGSLEIPFPFGTSESCYLDSSFLISCNHTSSGPTPYLTTGNITVLNISLDGEMRILAAVATGCYDGNGTRINATSKSWHYSLSRNHHYLSVSSSRNKLTAVGCNTVGEIIGFDDTTGLNYTTGCLSTCLRINDTTNGVCNGAGCCQSPIPAQGRLSGILYASLKGLDDSNYGFGFDPCGYAFVAEDGAYSFSSADLTNFRQQRLPVVLDWSVGNLSCEEAKKNASNYACKAENSECYNSGLGYLCNCSTGFRGNPYLLGDCQQDIDECMEKELNDCYSGAICKNLHGSYTCTCPKGFEGDGRENGTKCSRVSVGVIALLVIRFYVYWKMKEKRLDKLKEQFFQQNGGFILLEQISRHRGSIETAKVFTVEELKKATNNFDEAKILGKGGQGTVYKGLLSDNRTVAIKRSKISGSTQVEQFINEVVLLSQINHRNVVRLLGCCLETQVPLLVYEFIPNGTIFEHLHDHNQSLKLTWGTRLRIAIETAGALAYLHSATYMPIIHRDIKTTNILLDSHLTAKISDFGASKIVPLDQTELTTLVQGTLGYLDPEYMHTSQLTEKSDVYSFGVILAELLTGKKAVSFADPEVRNLAAYFVSSMEEGRLLEIVDQHIINEVKVEHLVEFANVAKQCLRVKREERPTMKEVASELEGLREAVGEKHRWESDKSSSEVTKSLLKASSSSVFDVQSSKFDSISQVSMSLGGGR 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc31432g00001 742 Pfam Wall-associated receptor kinase galacturonan-binding 35 92 IPR025287 GO:0030247
Stsc31432g00001 742 ProSitePatterns Calcium-binding EGF-like domain signature. 302 329 IPR018097 GO:0005509
Stsc31432g00001 742 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 24 695 IPR045274 GO:0007166
Stsc31432g00001 742 FunFam Wall-associated receptor kinase 2 387 492 - -
Stsc31432g00001 742 ProSitePatterns Serine/Threonine protein kinases active-site signature. 538 550 IPR008271 GO:0004672|GO:0006468
Stsc31432g00001 742 SMART serkin_6 417 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc31432g00001 742 Gene3D Phosphorylase Kinase; domain 1 389 492 - -
Stsc31432g00001 742 CDD EGF_CA 302 338 - -
Stsc31432g00001 742 FunFam Fibrillin 2 297 343 - -
Stsc31432g00001 742 SUPERFAMILY Protein kinase-like (PK-like) 401 692 IPR011009 -
Stsc31432g00001 742 CDD STKc_IRAK 423 689 - -
Stsc31432g00001 742 Gene3D Laminin 254 346 - -
Stsc31432g00001 742 SMART egf_5 305 347 IPR000742 -
Stsc31432g00001 742 SMART egf_5 254 300 IPR000742 -
Stsc31432g00001 742 ProSiteProfiles EGF-like domain profile. 302 341 IPR000742 -
Stsc31432g00001 742 SMART egfca_6 302 347 IPR001881 GO:0005509
Stsc31432g00001 742 Pfam Calcium-binding EGF domain 302 346 IPR001881 GO:0005509
Stsc31432g00001 742 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 320 331 IPR000152 -
Stsc31432g00001 742 Gene3D Transferase(Phosphotransferase) domain 1 493 714 - -
Stsc31432g00001 742 ProSiteProfiles Protein kinase domain profile. 417 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc31432g00001 742 FunFam Wall-associated receptor kinase 2 493 710 - -
Stsc31432g00001 742 SUPERFAMILY EGF/Laminin 301 340 - -
Stsc31432g00001 742 Pfam Protein kinase domain 418 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc31432g00001 Stsc-Chr31432 4845 10010 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc31432g00001 11 735 Receptor kinase-like Gene Family AT1G21230 44.947 0.0 586
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Stsc31432g00001 Pkinase 6.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc31432g00001 - - aip:107607783 958.747