Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc31428g00001 ATGGACAATAGTAGCACAAAGTCGACGGAGGATGTTGATGACACCCAAGATTTGAGCTTTGAATATGAGTGCAGTTCCGATGAAAGCGACAACATGGCAGCTGGAGATGTGAACATGTCCGAAGCAAATGCGATCAACATTGATGGCGAAGAAAAGTTGATAACTGATTTGCAAATCGAAGACATATGGGGATTGGTGTTTGATAGCGAATCCGAAGTATGCGACTTTTATGCTACATATGCAAGGTGTCATGGATTTGTTTCTCGAAAAGACTTCAAATCTGTAGATGTTAACGACAATATAAATGCAAGACAATTGGTATGCAATAAAGCAAGAGTAAGACATTGGAAGTACCTTGAAAAGGAAAACCAACAAAGGGAGCATAGAGCAATTACTCGCGTCAATTGCGAGGCCAAGATTCGCTTTAGTAGTGATGGCAGGTCGGGTAGGTGGAAAGTCAGTGCTTACGGCAATAGCGGGCTACCGGCGTAG 492 0.4289 MDNSSTKSTEDVDDTQDLSFEYECSSDESDNMAAGDVNMSEANAINIDGEEKLITDLQIEDIWGLVFDSESEVCDFYATYARCHGFVSRKDFKSVDVNDNINARQLVCNKARVRHWKYLEKENQQREHRAITRVNCEAKIRFSSDGRSGRWKVSAYGNSGLPA 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc31428g00001 163 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 7 154 - -
Stsc31428g00001 163 MobiDBLite consensus disorder prediction 1 20 - -
Stsc31428g00001 163 Pfam FAR1 DNA-binding domain 75 155 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc31428g00001 Stsc-Chr31428 14047 17223 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc31428g00001 FAR1 3.9e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc31428g00001 - - ahf:112701631 216.468