Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc31395g00001 ATGGCAGAAGAAAATAAAGAGGAAAGAGGAGAAGAAGATTTAGAGCTTCCCATGTACGACCTTGCTACAATAGTGAAGGCCACTAACAACTTCTCTATTGACAATAAACTTGGTGAAGGAGGGTTTGGCCCAGTGTACAAGGGTACACTTGAAACTGGACAAGAAATTGCAGTAAAACGACTTTCAGGAAGTTCTGCACAAGGAATGAATGAATTTAAGAATGAAGTAATATTGTGTGCTAAACTTCAACATCGAAATCTTGTCAGGGTTCTTGGTTGTTGCATTCAAGAAGATGAGAAGATGCTGGTTTATGAATACATGTCTAACAAAAGCTTAGACTTGTTTCTTTTCGATTCAATTCAAAGCAAATTTTTGGATTGGTCCAGGCGCTTTGACATTATTTGTGCAATAGCCCGAGGACTTCTTTATCTTCATCAAGATTCCAGATTAAGAATTATACATAGAGATCTTAAAGCAAGTAACATATTATTAGATTGCAATATGGAAGCAAAAATCTCAGACTTTGGCATGGCAAGATTGCGTGGGAGAGATCAAGACGAAGGAAATACAAATAGAATTGTTGGAACATAG 591 0.3689 MAEENKEERGEEDLELPMYDLATIVKATNNFSIDNKLGEGGFGPVYKGTLETGQEIAVKRLSGSSAQGMNEFKNEVILCAKLQHRNLVRVLGCCIQEDEKMLVYEYMSNKSLDLFLFDSIQSKFLDWSRRFDIICAIARGLLYLHQDSRLRIIHRDLKASNILLDCNMEAKISDFGMARLRGRDQDEGNTNRIVGT 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc31395g00001 196 SMART serkin_6 31 194 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc31395g00001 196 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1 106 - -
Stsc31395g00001 196 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 7 196 - -
Stsc31395g00001 196 SUPERFAMILY Protein kinase-like (PK-like) 16 196 IPR011009 -
Stsc31395g00001 196 Gene3D Phosphorylase Kinase; domain 1 2 106 - -
Stsc31395g00001 196 ProSiteProfiles Protein kinase domain profile. 31 196 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc31395g00001 196 Gene3D Transferase(Phosphotransferase) domain 1 107 196 - -
Stsc31395g00001 196 Pfam Protein tyrosine and serine/threonine kinase 32 186 IPR001245 GO:0004672|GO:0006468
Stsc31395g00001 196 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Stsc31395g00001 196 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 107 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc31395g00001 Stsc-Chr31395 873 1963 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc31395g00001 18 196 Receptor kinase-like Gene Family AT4G23190 63.687 7.52e-79 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc31395g00001 PK_Tyr_Ser-Thr 5.2e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc31395g00001 - - gmx:100790436 307.76