Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc31389g00001 ATGTTTTCACAGAAACTTATTACCAGCTTCTCTTCTCTTCTTTGGCTTCTTCCATTGCTGTTGATCCTGCTAAGCAATGCTAAAGTTAATGGTGTTGAGCAAAAGAACTTTTACATTGTTTTCCTAAGAGATCATCCTCTTACTAGAGACAATGCACATCATGAGGCACATTTAAATGTTCTATCAACTGTTAAAGAAAGCTACATTGAAGCCAAAGAATCCTTGGTGTACAGCTACACAAAGAGCTTCAATGCATTTGCTGCTAAACTCTCTGAGGATGAAGCCAAAAAGTTATCTGCCAAGGATGAAGTGCTTTCAGTGTTTCCGAATCGGTACCACAAGCTACACACTACAAGATCATGGGACTTCATTGGTTTGCCTTTGACTGCTAAGAGAAAATTGCAGTCAGAGAGTGACACCATTGTAGGGCTTTTGGACACAGGGATCACTCCAGAGTTTCAAAGCTTCAAGGACAATGGACTTGGTCCTCCACCAGCTAAATGGAAAGGAACTTGTGATCACTTTGCTAATTTCTCAGGCTGCAATAACAAGCTTATAGGAGCAAGATACTTTAAGCTTGATAAAGTGGATGATCCGGAAGATATATTGTCCCCCATAGATGTTAATGGCCATGGAACTCACACTTCTTCAACAGCAGCAGGAAATCTTGTCCCTAAAGCAAGTCTCTTGGGCTTGGCCGAAGGAACTGCTCGCGGCGCAGTTCCATCGGCCAGGCTGGCCATTTACAAGGTCTGCTGGCAGGGCAGTGGATGTGCTGACATGGACTTGTTAGCTGCATTTGAAGCAGCTATCCATGATGGTGTGGATGTCATATCAATTTCAATAGGTGGAGGGGACTCAAATTATTTGAAGGACTTCATCGCAATTGGCGCGTTTCATGCAATGAGGAATGGCATAATCACGGTGGCCTCGGCCGGAAATGATGGCCCGGCTTTGGGGACCGTCACGAATGGCGCGCCGTGGATTGTGACGGTTGCAGCTAGTGGCATTGATAGGGAGTTCAAAAGTACTATAGAGTTGGGGAATGGAAAGAATGTTTCTGGTGCAGGAGTAAGTACTTTTAGTCCAGAAAAAAAAGAGTACCCCCTAATCAATGGGGTTGATGCAGCCAAAAACTCTGATAGCAAGGACAGTGCAAGCTTCTGCTTTGAAGACTCTTTAGACCCAAAAAAAGTGAAGGGAAAGGTTGTTTACTGCAAACAAGGAACAGGTGGAACTGAAGGTGTTGTCAAAGGGTTTGGAGGAATTGGTACTATACTTGAAAATGAACAATATCCTGAAGTTGCCCAAATTTTCATGGCTCCTGCTACCATTGTTAACACTACCATAGGCCAAAGCATTACCACTTATATAAAGTCAACAAGATCACCATCAGCAGTGATACTTAAGAGCCATGAAGTGAAAAGACCAGCTCCATTTACTGCTTCATTTTCATCAAGGGGTCCAAGTCCAAGTTCCAAAAATATTCTCAAGCCTGATATAGCAGCTCCTGGAGTTAACATATTGGCATCTTACACACTAAGGAAATCAATAACTGGTTTGAAAGGGGATACTCAATTTTCAGAATTCACTCTAATGTCAGGAACTTCCATGTCATGCCCTCATGTTGCTGGAGTAGCAGCATATGTCAAGTCTTTTCACCCAGATTGGACTCCAGCTGCTATCAGATCTGCCATTATAACCACAGCTAAACCTATGAGCAAGAGAGTTGACAAGGAGGCCGAATTAGCCTTCGGCGCTGGACAAGTAAACCCGACGAAAGCTGTGAATCCCGGTCTAGTCTACGACATGGACGACCTCGGTTATATCCAATTCCTATGCCATGAGGGCTACAATGGTTCCGCTTTATCAGTACTAGTAGGACACCCTATAAATTGCACCTCTTTGGTACCAGGACTTGGCCATGATGCTATCAACTACCCTACAATTCAATTCAATGTGAAAAAAGACAAAGAAACAACACTTGGTGTTTTTAGGAGAAGAGTTACCAATGTTGGTCCTGTTCCAACAATCTTCAATGCTACCATTACAGCTCCTAAGGGGGTGGAAATTACAGTTAAGCCAACCAGCCTTGTTTTCTCAAAGACTCTGCAGAAAAGGAGCTTCAAGGTTGTGGTGAAAGCAAAAACAATGCCAAGTATGACAGTTGTGTCTGGTTCTCTTGTTTGGAGAAGTCCACGTTACATTGTTAGGAGCCCCGTTGTTGTCTATAGTCCTTAA 2241 0.4337 MFSQKLITSFSSLLWLLPLLLILLSNAKVNGVEQKNFYIVFLRDHPLTRDNAHHEAHLNVLSTVKESYIEAKESLVYSYTKSFNAFAAKLSEDEAKKLSAKDEVLSVFPNRYHKLHTTRSWDFIGLPLTAKRKLQSESDTIVGLLDTGITPEFQSFKDNGLGPPPAKWKGTCDHFANFSGCNNKLIGARYFKLDKVDDPEDILSPIDVNGHGTHTSSTAAGNLVPKASLLGLAEGTARGAVPSARLAIYKVCWQGSGCADMDLLAAFEAAIHDGVDVISISIGGGDSNYLKDFIAIGAFHAMRNGIITVASAGNDGPALGTVTNGAPWIVTVAASGIDREFKSTIELGNGKNVSGAGVSTFSPEKKEYPLINGVDAAKNSDSKDSASFCFEDSLDPKKVKGKVVYCKQGTGGTEGVVKGFGGIGTILENEQYPEVAQIFMAPATIVNTTIGQSITTYIKSTRSPSAVILKSHEVKRPAPFTASFSSRGPSPSSKNILKPDIAAPGVNILASYTLRKSITGLKGDTQFSEFTLMSGTSMSCPHVAGVAAYVKSFHPDWTPAAIRSAIITTAKPMSKRVDKEAELAFGAGQVNPTKAVNPGLVYDMDDLGYIQFLCHEGYNGSALSVLVGHPINCTSLVPGLGHDAINYPTIQFNVKKDKETTLGVFRRRVTNVGPVPTIFNATITAPKGVEITVKPTSLVFSKTLQKRSFKVVVKAKTMPSMTVVSGSLVWRSPRYIVRSPVVVYSP 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc31389g00001 746 Pfam Subtilase family 138 588 IPR000209 GO:0006508|GO:0008236
Stsc31389g00001 746 SUPERFAMILY Subtilisin-like 115 600 IPR036852 GO:0004252|GO:0006508
Stsc31389g00001 746 Gene3D - 613 745 - -
Stsc31389g00001 746 CDD Peptidases_S8_3 113 570 IPR034197 -
Stsc31389g00001 746 PRINTS Subtilisin serine protease family (S8) signature 207 220 IPR015500 -
Stsc31389g00001 746 PRINTS Subtilisin serine protease family (S8) signature 137 156 IPR015500 -
Stsc31389g00001 746 PRINTS Subtilisin serine protease family (S8) signature 534 550 IPR015500 -
Stsc31389g00001 746 Pfam Fibronectin type-III domain 645 743 IPR041469 -
Stsc31389g00001 746 ProSiteProfiles Serine proteases, subtilase domain profile. 120 596 - -
Stsc31389g00001 746 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 25 116 IPR037045 -
Stsc31389g00001 746 Gene3D - 338 474 - -
Stsc31389g00001 746 ProSitePatterns Serine proteases, subtilase family, serine active site. 535 545 IPR023828 -
Stsc31389g00001 746 Gene3D Peptidase S8/S53 domain 139 606 IPR036852 GO:0004252|GO:0006508
Stsc31389g00001 746 FunFam Subtilisin-like protease SBT1.5 139 358 - -
Stsc31389g00001 746 CDD PA_subtilisin_like 344 468 - -
Stsc31389g00001 746 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 70 743 IPR045051 -
Stsc31389g00001 746 FunFam Subtilisin-like protease SBT5.3 26 116 - -
Stsc31389g00001 746 Pfam Peptidase inhibitor I9 38 116 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc31389g00001 Stsc-Chr31389 10780 14761 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc31389g00001 35 584 Subtilisin-like Serine Gene Family AT4G00230 65.399 0.0 727
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc31389g00001 - - ccaj:109800351 1167.14