Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc31385g00002 | ATGGTTGCTGTAAACAAAGATAAGAACAGCATTGATGCATTTCGTTGGGCAACCGAGAATATTGATAATCCAATTGTTATTGCTGTTCATGTCAAGGACAAAGAAATTCCTCATCAGGGCAAGAATGTTTTCCCACCTGACGAAGATGATTTAGAAATTATTTTCAAACAATTGCGTGAAGAGTGTCATCCTAAAGTCGAAAAGATGAAGGAAGCTGTAATTTATGATAGTGATGTTGTGAAAGCAATAATAGAATATGCAGCAAGGAATCGTGTTCATACACTTGTTCTTGGTGCACCCAGCGGTTCCAACAAGAAGAACACTTTGGCAAAATCTTTTTCTCTTCAATTCTCTAAGGCATCAAGCAAGAAAGTGAAAGGCGTAGAAGTAGCAATGGGAGTAATGAGATCAGCACCAGAATTCATATCAGTGTATGTAATTAAAAAGGGAAGAAAGATAGTGGCAGCAAGAGCATCAACACACCCATTGATTGGGGCAACACCACCAAGGCAATCTAGTGTTGATTTGGAAATGGAAAATAATGGATCACTAAGGGCACCATCACAACCACAATTACATAGAGGATTAAGCACCAATAGTAGATCTCAAAGAATAATGAGTGACAACAGAAGAAGATTTTCAAGGGTGGATTCAATGGCAGAGAGCGTTGACCTAACTAGATGTCGTAGAGAAACAAGGTTATCATCAATGACCCCTGAATCATCAACAATAATCTTTGATTTCAATAATTACTCTCCTTCTAATAATGGGATTGTTGCTGATTCTTCTGCCTCTCCTGTGACAAATTGCATCCATCAATCGTTGAAAATCACAAACTCCAAAAGAGAAAAGAGTGAAGTTGAAGCTGAGATGAATCAATTGAAGCAAATGCTGAAGGAAACTATGGACTTGTACAGTGTAGCTTGCAAAGAAGCTATTGCAGCCCAAAATAAGGCTAGAGAGATTAATCAATGGAAATTGAACGAGGCGCCTAAGATCGAGAAAGCTAGGCTAGCCGAAGAGGCGGCTGTGGCGCTAGCCAAGGAGGAGAAGGCTAAGGCGAGGATGGCGATTGAAGTGGCGAATCAAGCGATGAAGAAGGCTGAAGAAGAAGCAAAGCGAAGAGCGGAAGCAGAGAGGAAGGCTAAGTTGGAGGCAGAGGAGAAAGAGAAGGCCTTAAATGTGTTGGCTTATAAGGATTTTAGGTATAGGAAATACACCATAGAAGACATTGAAAAAGCTACTGATAATTTCTCAATATCATTGAGAATTGGTGAAGGTGGATATGGACCTGTCTTTAGAGGCCAACTTGATCACACCCCTGTTGCTATCAAAATCTTGAGACCTGATGCTTCACAGGGCAGAAGGCAGTTTCATCAAGAGGTTGAAGTATTATGCAGCATTAGGCATCCTAATATGGTCCTTCTCCTTGGTGCTTGCCCTGACTATGGATGCTTAGTGTATGAATTCATGGATAATGGTAGCTTAGAAGATAGACTTATTCGAAAAAATAATACTCCTCCTCTCCCATGGCCAAAACGGTTTGAAATAGCGGCCGAGATAGCGACCGCACTCCTCTTTCTTCACCAGGCTAAACCGGAGCCAATCGTGCATCGAGACCTTAAACCGGCCAACATTCTCCTTGACCGGAATTTTGTGAGCAAAATAAGTGACGTCGGCCTAGCAAGACTAGTACCATCGTCTGTAGTTGATTCGGTCACACAGTACTACATGACGACGGCGGCTGGAACGATGCATTATATCGATCCAGAGTATCAACAAACCGGAAGACTAACACCAAAATCAGATGTATATTCATTGGGAATAATGCTACTTCAAATAATCACAGCTAGGCCTCCATTAGGGTTACCTCATCAAGTTAAAAGAGCAATAGAAAAGGGTCAACTTTCTAACGTTCTTGATCCATCGGTAACTGATTGGCCAGTTGAAGAGGCACTAAGCTTTGCTAAATTGGCATTGCAATGCTCAGAACTAAGAAAAAGGGATAGGCCAGATCTTGCAACAGTTATAGTGCCAGAGCTTAATCGTTTAAGAAACTTTGGTTATGAATCAACTGGCCATAACTATTCTTCCTTCTAA | 2100 | 0.4124 | MVAVNKDKNSIDAFRWATENIDNPIVIAVHVKDKEIPHQGKNVFPPDEDDLEIIFKQLREECHPKVEKMKEAVIYDSDVVKAIIEYAARNRVHTLVLGAPSGSNKKNTLAKSFSLQFSKASSKKVKGVEVAMGVMRSAPEFISVYVIKKGRKIVAARASTHPLIGATPPRQSSVDLEMENNGSLRAPSQPQLHRGLSTNSRSQRIMSDNRRRFSRVDSMAESVDLTRCRRETRLSSMTPESSTIIFDFNNYSPSNNGIVADSSASPVTNCIHQSLKITNSKREKSEVEAEMNQLKQMLKETMDLYSVACKEAIAAQNKAREINQWKLNEAPKIEKARLAEEAAVALAKEEKAKARMAIEVANQAMKKAEEEAKRRAEAERKAKLEAEEKEKALNVLAYKDFRYRKYTIEDIEKATDNFSISLRIGEGGYGPVFRGQLDHTPVAIKILRPDASQGRRQFHQEVEVLCSIRHPNMVLLLGACPDYGCLVYEFMDNGSLEDRLIRKNNTPPLPWPKRFEIAAEIATALLFLHQAKPEPIVHRDLKPANILLDRNFVSKISDVGLARLVPSSVVDSVTQYYMTTAAGTMHYIDPEYQQTGRLTPKSDVYSLGIMLLQIITARPPLGLPHQVKRAIEKGQLSNVLDPSVTDWPVEEALSFAKLALQCSELRKRDRPDLATVIVPELNRLRNFGYESTGHNYSSF | 699 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc31385g00002 | 699 | Gene3D | Phosphorylase Kinase; domain 1 | 397 | 490 | - | - | |
Stsc31385g00002 | 699 | SUPERFAMILY | Adenine nucleotide alpha hydrolases-like | 1 | 114 | - | - | |
Stsc31385g00002 | 699 | Gene3D | HUPs | 1 | 129 | IPR014729 | - | |
Stsc31385g00002 | 699 | FunFam | Adenine nucleotide alpha hydrolase-like domain kinase | 390 | 490 | - | - | |
Stsc31385g00002 | 699 | Pfam | Protein tyrosine and serine/threonine kinase | 421 | 676 | IPR001245 | GO:0004672|GO:0006468 | |
Stsc31385g00002 | 699 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 536 | 548 | IPR008271 | GO:0004672|GO:0006468 | |
Stsc31385g00002 | 699 | Coils | Coil | 344 | 395 | - | - | |
Stsc31385g00002 | 699 | ProSiteProfiles | Protein kinase domain profile. | 418 | 681 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc31385g00002 | 699 | Gene3D | Transferase(Phosphotransferase) domain 1 | 491 | 692 | - | - | |
Stsc31385g00002 | 699 | MobiDBLite | consensus disorder prediction | 183 | 204 | - | - | |
Stsc31385g00002 | 699 | Coils | Coil | 277 | 304 | - | - | |
Stsc31385g00002 | 699 | PANTHER | OS02G0152300 PROTEIN | 2 | 691 | - | - | |
Stsc31385g00002 | 699 | SUPERFAMILY | Protein kinase-like (PK-like) | 400 | 677 | IPR011009 | - | |
Stsc31385g00002 | 699 | SMART | serkin_6 | 418 | 681 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc31385g00002 | Stsc-Chr31385 | 4546 | 10533 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc31385g00002 | 69 | 688 | Receptor kinase-like Gene Family | AT5G12000 | 54.474 | 0.0 | 628 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-IXb | Stsc31385g00002 | PK_Tyr_Ser-Thr | 7e-40 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc31385g00002 | - | - | gmx:100786386 | 720.309 |