Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc31359g00002 ATGGCTGAAGATACTTCAGGTCTTGATTTGCCTCATGGAAGTCTTAGCCTTTTAAAAGATCAAGTTCATTTGGTTAAAAGGAAAGACTTGGATCGGTATGAGATCGCGGCGAGCCAAGATCAGTTATCATTCGAGAAAGGATTCTTTATAGTAATCCGTGCGTGCAAGATGTTGGCGCAAAAGAATGATGGAATGATATTGGTAGGCGTGGCAGGTCCTTCGGGAGCAGGGAAGACTATGTTCACAGAAAAGATCCTAAACTTCATGCCAAGCATTGCAGTGATTTCAATGGACAATTACAATGATGCAAGTAGAATTGTTGATGGAAACTTTGATGATCCGCGCTTAACAGATTATGAAACATTGCTCCAAAATTTACATGATTTAAGGGCAGGAAAGGCAGTGCAGGTTCCTATATATGATTTCAAGTCGAGTTCACGAACAGGATACAGAACTGTCGATGTCCCAAGCTCCCGAATTGTGATCATAGAGGGAATCTATGCCTTGAGTGAGAAGCTACGGCCGCTACTAGACCTTCGAGTATCTGTCACCGGTGGAGTACACCTTGACCTTGTTAAACGAGTTATACGCGACATACAACGAGCCGGACAAGAACCTGAAGAAATCATTCATCAAATATCTGAAACAGTATATCCAATGTACAAAGCATATATTGAGCCGGATCTTCAAACTGCACACATAAAAATCATCAACAAGTTCAATCCATTCACTGCATTCCAAAGTCCTACATACATATTAAAGTCAGCAAGGAATGTAACAGTTGAACAAGTTAAAGATGTCATCTCCAAAGATTTTCACGAAACGAAGGAGCAGACTTATGACATATATCTTCTACCTCCCGGTGAAGATCCAGAGAGTTGTCAATCCTATTTACGGATGCGAAATACGGATGGGAAATACGTCCTCATGTTCGAGGAATGGGTGACAGATGATCCATTTGTGATATCACCAAGAATCACTTTTTCGGTTAGTGTGCGCCTCCTCGGTGGACTAATGGGGTTGGGATACACAATAGCAACCATCCTTAAAAGAAATAGTCATATCTTTTCTGATGACAGTGTCTGTGTTAAACTAGATTGGCTTGAGCAACTTAATAGACATTATGTTCAGGTACTTGGAAGAGATCGCTTACTAGTAAGTAACAAAGCGCAGCAGTTGGGTCTAGAAGGTTCTTACATTCCTCGAACCTACATCGAGCAGATCCAACATGAAAAGCTTGTTAAAGAAGTTATGGCCCTGCCGGAAGATTTAAAGATGACGTTGAGCCTTGACGAGGACTTCGTGTCTAGCCCGAAAGATTTTGCTGACCAGGTTTCCATGACCATGAGACATAAGCATATAGGTTTGTCTAGATCATTTACAAATCTAAGAGACAGGAATCAAGCCAAACTTGCCGGATATGTCTCCAACAATATAGACCTTCATGAAATAAATGATTCAGATGAAACCAAAATAATGGCAAATCAGGAAACCATAACTCAACTTTCGGAACAAATTTCTTCCTTATCTGATAGAATTGATGATTTTACAAACTATATTGAAGCGCTGAACTCCAACTTAACCATGGAGAAAAATTGGCAATACCAAGAAGATATGCACCCACAAGTTGGTGCCTGCAATGGTTGTGCTCCCACCTGTTACTTCATTTCTAGCTTGAGAAACGGTTCCTCCCCTTTGTCACAACTAACTAAGGAGTTTACTTTAATGGATGAGATATCAGGTATTATAAGGGGTCAACATCTTATCATGCATCAATTGGACAATCTCAATAAACTAGTTATGAGTAAAATTGATGAGAGGTCTCACCAAGTAAGAGCTATGAAGAAAGGGCATTCAGATTCAACTGGACCAGAAGTTTTGATGGGTTTGGGTTTTGGTTGTTTAGGAATTTTCTTCATGATGGGTATTTATTATAGATTGAGGAAGTAG 1950 0.401 MAEDTSGLDLPHGSLSLLKDQVHLVKRKDLDRYEIAASQDQLSFEKGFFIVIRACKMLAQKNDGMILVGVAGPSGAGKTMFTEKILNFMPSIAVISMDNYNDASRIVDGNFDDPRLTDYETLLQNLHDLRAGKAVQVPIYDFKSSSRTGYRTVDVPSSRIVIIEGIYALSEKLRPLLDLRVSVTGGVHLDLVKRVIRDIQRAGQEPEEIIHQISETVYPMYKAYIEPDLQTAHIKIINKFNPFTAFQSPTYILKSARNVTVEQVKDVISKDFHETKEQTYDIYLLPPGEDPESCQSYLRMRNTDGKYVLMFEEWVTDDPFVISPRITFSVSVRLLGGLMGLGYTIATILKRNSHIFSDDSVCVKLDWLEQLNRHYVQVLGRDRLLVSNKAQQLGLEGSYIPRTYIEQIQHEKLVKEVMALPEDLKMTLSLDEDFVSSPKDFADQVSMTMRHKHIGLSRSFTNLRDRNQAKLAGYVSNNIDLHEINDSDETKIMANQETITQLSEQISSLSDRIDDFTNYIEALNSNLTMEKNWQYQEDMHPQVGACNGCAPTCYFISSLRNGSSPLSQLTKEFTLMDEISGIIRGQHLIMHQLDNLNKLVMSKIDERSHQVRAMKKGHSDSTGPEVLMGLGFGCLGIFFMMGIYYRLRK 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc31359g00002 649 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 65 236 IPR027417 -
Stsc31359g00002 649 PANTHER URIDINE KINASE 16 422 - -
Stsc31359g00002 649 Pfam Phosphoribulokinase / Uridine kinase family 68 236 IPR006083 GO:0005524|GO:0016301
Stsc31359g00002 649 Pfam CYTH domain 270 404 IPR023577 -
Stsc31359g00002 649 Gene3D - 65 272 IPR027417 -
Stsc31359g00002 649 PRINTS Uridine kinase signature 224 237 - -
Stsc31359g00002 649 PRINTS Uridine kinase signature 188 198 - -
Stsc31359g00002 649 PRINTS Uridine kinase signature 132 147 - -
Stsc31359g00002 649 PRINTS Uridine kinase signature 65 82 - -
Stsc31359g00002 649 CDD UMPK_like 67 239 - -
Stsc31359g00002 649 SUPERFAMILY CYTH-like phosphatases 268 407 IPR033469 -
Stsc31359g00002 649 ProSiteProfiles CYTH domain profile. 245 410 IPR023577 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc31359g00002 Stsc-Chr31359 8289 12114 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc31359g00002 53 236 PRT Gene Family AT1G55810 30.412 3.53e-18 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc31359g00002 K00876 - gmx:100781286 924.08