Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc31357g00001 ATGTCCAGCTTCCTAATCCCTCTGCTTTTCTTCCTTCTTTGCTGCAACTCTCTTGCACCTCTTGTGTATTCCCTCAATGCCGAAGGCTCTGTGCTCTTGACTCTCAAGCACTCCCTCCAAGACCCACAAGGCTCCATGGCTACTTGGAATTCTTCCCATGACAACCCTTGTTCATGGAACGGCATTACCTGCAAGGACCAAACTGTTGTCTCCATTAGCATCCCAAAACGCAAACTTTATGGCTCTCTCCCTTCAACTCTCGGATCTCTCTCCCAGCTCCGCCATCTCAACTTCAGGAACAACATGCTCTTTGGAACCTTGCCCACTCAGCTCTTTCAAGCTCAGGGGCTGCAAAGTTTGGTGCTTTATGGCAATTCTTTCTCTGGGCCTCTTCCCACTGAGATTCAGAATCTCAGGTACCTTCAAACTCTTGACTTGTCACAAAATTTCTTCAATGGTTCATTGCCTGCCACAATTGTCCAATGCAAGAGGCTCAGAACCCTTGTTCTCAGTAGAAACAATTTCACTGGCACTTTGCCAATTGGATTTGGTACTAGTTTCCCTTCTCTTGAGAAACTTGACCTCTCTTTCAATCAATTCAATGGTTCAATTCCTGCAAACATGGGTAATCTAACTAGCCTTCAAGGAACTGTTGATTTGTCTCATAATCATTTTAGTGGTTCAATACCAGCTAGCCTTGGTAACTTGCCTGAGAAGGTTTACATTGATCTTACTTACAACAATTTGAATGGTCCAATACCACAAAATGGTGCTTTAATGAATAGAGGACCAACTGCTTTTATTGGCAATCCTGGTCTATGTGGCCCTCCTTTGAAGAATCCATGTGCCCCTGACACTCCAGGTGCTAGTTCACCTTCCTCATTCCCATTCATGCCTCATAATGAATCACCTCAGGATAATGGCAATGGTTCTGGGAAGAGTGAGAAAACCAAAGGGTTAACTAAGGGTGCTGTGGTTGGCATTGTTGTGGGTGATGTGATTGGAATTTGCCTTTTAGGTCTTCTGTTCTCTTATTGCTACTCGAGGGTTTGTGGTTTTGATCAGGATCAGGATGTTATTGGTGTTAGCAAGGGGAGGAAAGGAAGTAGTAAAGAGTGTTTCTGCTTCCTAAAGGACGAATCAGAGGCCCTGTCTGATCATGTTGAGCAGTATGATCTTGTTCCATTAGATAGCCAAGTGGCCTTTGATTTGGATGAACTTCTTAAGGCATCGGCTTTCGTTCTTGGGAAAAGTGGAATTGGAATTATGTACAAAGTGGTGCTTGAAGACGGGCTTGCGTTGGCGGTGAGAAGGTTAGGGGAGGGAGGTTCTCAAAGGTTCAAAGAGTTCCAAACCGAAGTAGAGGCAATAGGGAAGTTGAGACATCCAAACATTGTGACTCTCAGAGCTTATTACTGGTCTGTTGATGAGAAGCTTCTCATATATGATTATATACCGAATGGAAGCCTTGCTGCTGCAATTCATGGGAAGCCTGGACTAGTTACATTTAGACCACTATCATGGTCTTATCGAATGAAAATCATGAAAGGAACTGCAAAAGGATTGGTCTACCTGCATGAGTTTAGTCCCAAAAAGTATGTCCATGGAGACCTGAAGCCTAGTAACATCCTTCTTGGACATAACATGGAACCACACATATCTGATTTTGGACTTGGGCGCCTTGCAAATATTGCCGGAGGTTCCCCAACCGTGCAATCCAGCCGAGTGGCTGCCGAGAAGCCGCAAGAGAGGCAAAAAAGCTTGTCTGTAGAACTTACACCTAATATCTTGGGGAATGGTTATCAGGCTCCAGAAACACTGAAAGTGGTGAAGCCTTCACAGAAGTGGGATGTTTATTCATATGGTGTGATCTTGTTGGAGATTATCAGCGGACGGTTACCGATTGTGCAAGTTGGTAACTCGGAAATGGACCTTGTTCAATGGATTCAGTTCTGCATTGAAGAGAAGAAGCCACTCTCAGATGTGTTGGACCCATGTCTAGCTGAGGAGGCAGATAAGGAAGAGGAGATAATTGCAGTGTTGAAGATTGCAATGGCTTGTGTCCTAAGCAGCCCTGAAAAGAGACCTACAATGAGGCATGTCCTTGATGCTTTGGATAGATTATGTGTATCCTCTGATTGA 2142 0.4449 MSSFLIPLLFFLLCCNSLAPLVYSLNAEGSVLLTLKHSLQDPQGSMATWNSSHDNPCSWNGITCKDQTVVSISIPKRKLYGSLPSTLGSLSQLRHLNFRNNMLFGTLPTQLFQAQGLQSLVLYGNSFSGPLPTEIQNLRYLQTLDLSQNFFNGSLPATIVQCKRLRTLVLSRNNFTGTLPIGFGTSFPSLEKLDLSFNQFNGSIPANMGNLTSLQGTVDLSHNHFSGSIPASLGNLPEKVYIDLTYNNLNGPIPQNGALMNRGPTAFIGNPGLCGPPLKNPCAPDTPGASSPSSFPFMPHNESPQDNGNGSGKSEKTKGLTKGAVVGIVVGDVIGICLLGLLFSYCYSRVCGFDQDQDVIGVSKGRKGSSKECFCFLKDESEALSDHVEQYDLVPLDSQVAFDLDELLKASAFVLGKSGIGIMYKVVLEDGLALAVRRLGEGGSQRFKEFQTEVEAIGKLRHPNIVTLRAYYWSVDEKLLIYDYIPNGSLAAAIHGKPGLVTFRPLSWSYRMKIMKGTAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHISDFGLGRLANIAGGSPTVQSSRVAAEKPQERQKSLSVELTPNILGNGYQAPETLKVVKPSQKWDVYSYGVILLEIISGRLPIVQVGNSEMDLVQWIQFCIEEKKPLSDVLDPCLAEEADKEEEIIAVLKIAMACVLSSPEKRPTMRHVLDALDRLCVSSD 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc31357g00001 713 Gene3D Transferase(Phosphotransferase) domain 1 485 712 - -
Stsc31357g00001 713 MobiDBLite consensus disorder prediction 279 316 - -
Stsc31357g00001 713 SUPERFAMILY L domain-like 27 279 - -
Stsc31357g00001 713 Pfam Leucine rich repeat N-terminal domain 26 64 IPR013210 -
Stsc31357g00001 713 Gene3D Ribonuclease Inhibitor 22 79 IPR032675 -
Stsc31357g00001 713 CDD STKc_IRAK 415 708 - -
Stsc31357g00001 713 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 25 185 - -
Stsc31357g00001 713 Gene3D Phosphorylase Kinase; domain 1 380 484 - -
Stsc31357g00001 713 MobiDBLite consensus disorder prediction 286 316 - -
Stsc31357g00001 713 Pfam Protein kinase domain 415 703 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc31357g00001 713 SMART LRR_typ_2 90 114 IPR003591 -
Stsc31357g00001 713 SMART LRR_typ_2 187 211 IPR003591 -
Stsc31357g00001 713 SMART LRR_typ_2 138 162 IPR003591 -
Stsc31357g00001 713 FunFam Leucine-rich repeat receptor-like protein kinase 392 484 - -
Stsc31357g00001 713 ProSiteProfiles Protein kinase domain profile. 409 708 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc31357g00001 713 SMART serkin_6 414 708 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc31357g00001 713 PANTHER OS05G0588300 PROTEIN 135 707 - -
Stsc31357g00001 713 Gene3D Ribonuclease Inhibitor 80 286 IPR032675 -
Stsc31357g00001 713 FunFam Leucine-rich repeat protein kinase family protein 485 711 - -
Stsc31357g00001 713 ProSitePatterns Serine/Threonine protein kinases active-site signature. 533 545 IPR008271 GO:0004672|GO:0006468
Stsc31357g00001 713 FunFam Leucine-rich repeat receptor-like protein kinase 189 284 - -
Stsc31357g00001 713 SUPERFAMILY Protein kinase-like (PK-like) 414 705 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc31357g00001 Stsc-Chr31357 2391 5095 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc31357g00001 8 713 Receptor kinase-like Gene Family AT2G01210 67.877 0.0 984
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Stsc31357g00001 Pkinase 5e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc31357g00001 - - gmx:100792873 1180.24