Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc31338g00002 ATGTGTATATCATTAGTGGATCAATCCAAGGAAGAACAAGAGGAAGATCCAGAGGTTAAATTCTATGACCTGTCAGTTATAGCTTCTTCCACAGATAACTTTTCAGACATAAACAAGCTTGGAGAAGGTGGTTTTGGACCTGTCTTCAAGGGAACATTGGAAAATGGACAAAGAATAGCAGTTAAGAGGCTCTCTACCAGTTCTGGACAAGGGATCAAAGAATTCAAGAATGTAATTGCATTAATTGCCAAACTTCAGCATCGTAATCTTGTCAGGCTGCAAGGATATTGCATTCAGAATGAAGAGAAATTACTTATATATGAATATATGCCTAATAAGAGCTTGGATTTCTTTATATTTGATCAAACACAGAGAATGGTTTTGGATTGGCCTACAAGAATTTCAGAAGGAGACCAGACCACAGAAATTACACGTTGCATTGTTGGAACATATGGATACATAGCACCAGAATATGCAATTGATGGAAACTTCTCGGTAAAATCAGACACTTATAGCTTTGGTGTTTTGTTGCTGGAGATAGTATCAGGAAAGAAAAACAGAGGAGATCAACATCACAAGGAACGTACAAACCTTACTGAACACGCATGGAAGTTGTGGATGGAAGGAAGACCTTTAGAGTTGATAAGTGAAGACCTAAAAGAATCATGCAATGGCTCCGAAGCATTGCGATGCATCCATATAAGTTTTCTGTGTCTTGAACAGCATCCACATGATAGGCCAAGCATGTCATCTGTGGTTATGATGTTAGGTAGTGAAATTCGCTTGCCTAAACCAAAACAACCAGCTCTTTTTGTTGGAGATTATTCTTTATCAAATAAGAGTAGTAACTTGCCTTCTGTTAATAAATTAAGTTTGTCCATTTTAGAACCACGTTAA 897 0.3746 MCISLVDQSKEEQEEDPEVKFYDLSVIASSTDNFSDINKLGEGGFGPVFKGTLENGQRIAVKRLSTSSGQGIKEFKNVIALIAKLQHRNLVRLQGYCIQNEEKLLIYEYMPNKSLDFFIFDQTQRMVLDWPTRISEGDQTTEITRCIVGTYGYIAPEYAIDGNFSVKSDTYSFGVLLLEIVSGKKNRGDQHHKERTNLTEHAWKLWMEGRPLELISEDLKESCNGSEALRCIHISFLCLEQHPHDRPSMSSVVMMLGSEIRLPKPKQPALFVGDYSLSNKSSNLPSVNKLSLSILEPR 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc31338g00002 298 Gene3D Phosphorylase Kinase; domain 1 3 109 - -
Stsc31338g00002 298 Pfam Protein tyrosine and serine/threonine kinase 151 255 IPR001245 GO:0004672|GO:0006468
Stsc31338g00002 298 Pfam Protein tyrosine and serine/threonine kinase 38 127 IPR001245 GO:0004672|GO:0006468
Stsc31338g00002 298 SUPERFAMILY Protein kinase-like (PK-like) 16 269 IPR011009 -
Stsc31338g00002 298 ProSiteProfiles Protein kinase domain profile. 34 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc31338g00002 298 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 2 109 - -
Stsc31338g00002 298 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 9 134 - -
Stsc31338g00002 298 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 135 261 - -
Stsc31338g00002 298 Gene3D Transferase(Phosphotransferase) domain 1 113 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc31338g00002 Stsc-Chr31338 7768 9157 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc31338g00002 23 270 Receptor kinase-like Gene Family AT4G23230 45.973 4.64e-85 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc31338g00002 PK_Tyr_Ser-Thr 1e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc31338g00002 - - ahf:112705336 469.544