Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc31323g00002 ATGAATAATAACGAGCTTTCAAAGGCAACAATAATGGAGCAAGAACTATTGAGAGGGCGTGACGTGGCAAACCAGTTACTTGAAGTAGTTGTTGATAATAATAATAATAATAAATCAAATAGCAGCAGAAAAGAAGAAGAAATTAGTGAAAGGTCAATGGTGATGCCTTTTGCTGAAGATGCTGTGCGCAAGGTTCTGAGATCGTTCACTAACACCCTCTTGCTTTTGAACAGCGATACCCAACATAACTCTCTTGCTATTCATCATCATCAAAGTTGCAACAGCAACAACAACAACAAGAAGAATAGTTTCAGCAACAAAAGTCCAAGTGGGTGCAACAAGAGAAAATCAGCTGCACCAACCTTGCAGAGTGACAGCTCAATTCTGTGTGAAGATGGCAATGCATGGAGAAAGTACGGACAAAAGAAGATGAAGAATTCCAAGTATCTCAGGAGCTACTACAAGTGCAGTTACAAGAAAGAAGAAAATTGCAATGCCATGAGACAAGTAGAGAGGATCCAAGAGGATCCTCCATTGTACCGTACAACCTATTATGGTCATCACACTTGCAAAAGCTCTCTCGCCAATCACCCTCACACAGAACTTGAAACCGCATCTTCCTTTGAATCTTCCACGTTACTATGCTTTACCAGTGATCACAATACCAATAATACCCTTCCAATAGTAACCAAACAAGAACCACAACCTTTTTCTTCTTCGTCAACAAAACAAGAAGAGCCCATGGAAGTGGTTTCTGATGACCGTATTGATCACGACCAATATTCCTTATCAAATGACTACGATATCTTAAGTGACTATGAACTTTATTTTAATTATTAG 840 0.3917 MNNNELSKATIMEQELLRGRDVANQLLEVVVDNNNNNKSNSSRKEEEISERSMVMPFAEDAVRKVLRSFTNTLLLLNSDTQHNSLAIHHHQSCNSNNNNKKNSFSNKSPSGCNKRKSAAPTLQSDSSILCEDGNAWRKYGQKKMKNSKYLRSYYKCSYKKEENCNAMRQVERIQEDPPLYRTTYYGHHTCKSSLANHPHTELETASSFESSTLLCFTSDHNTNNTLPIVTKQEPQPFSSSSTKQEEPMEVVSDDRIDHDQYSLSNDYDILSDYELYFNY 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc31323g00002 279 MobiDBLite consensus disorder prediction 227 250 - -
Stsc31323g00002 279 MobiDBLite consensus disorder prediction 90 119 - -
Stsc31323g00002 279 ProSiteProfiles WRKY domain profile. 125 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc31323g00002 279 SMART WRKY_cls 130 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc31323g00002 279 Gene3D WRKY domain 114 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc31323g00002 279 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 14 207 IPR044810 GO:0003700
Stsc31323g00002 279 MobiDBLite consensus disorder prediction 227 246 - -
Stsc31323g00002 279 Pfam WRKY DNA -binding domain 131 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc31323g00002 279 SUPERFAMILY WRKY DNA-binding domain 128 191 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc31323g00002 Stsc-Chr31323 7782 12603 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc31323g00002 14 191 WRKY Transcription Factor Family AT5G01900 35.829 3.28e-28 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Stsc31323g00002 WRKY 7.1e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc31323g00002 - - adu:110273813 324.324