Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc31305g00002 ATGCGGTGTATTGGTAATGGTAGGGCTTCCAATGGAGAGAGCAGCGTGGTTCGGTTCCCGCTGTCACCATCGAGCTCTTTAGTCATTCAGAAAGGAGATGTCACCAAATGGTCCATCGATGGTTCCTCCGATGCAATAGTAAATCCTGCAAATGAGAGAATGCTTGGAGGTGGTGGTGCAGATGGCGCTATACATATGGCTGCTGGTCCTGAACTTGTTCAAGCATGTTACAGTGTTCCAGAGGTGAGGCCTGGGGTTCGGTGCCCAACTGGGGAGGCAAGGATCACTCCTGGTTTTAGATTGCCTGCTTCTCATGTTGTTCATACTGTTGGACCAATCTACAATTCTAATAGTAACCCTGCTGCATCTCTTGCAAGTGCTTATAGGAATAGTTTGAGGGTTGCAAAGGAGAAAAACATTCAGCATATAGCATTCCCAGCTATATCATGTGGTGTCTTTGGGTATCCTTATGATGAGGCTGCCACAGTAGCGATTTCTGTCATCAAGGAGTTTCACAATGAGTTTAAGGAGGTCCACTTTGTTCTGTTCTTAGAAGATATTTATCAAGTTTGGGTAAATAAGGCAAATGATCTGATGAAAAATTAG 606 0.4472 MRCIGNGRASNGESSVVRFPLSPSSSLVIQKGDVTKWSIDGSSDAIVNPANERMLGGGGADGAIHMAAGPELVQACYSVPEVRPGVRCPTGEARITPGFRLPASHVVHTVGPIYNSNSNPAASLASAYRNSLRVAKEKNIQHIAFPAISCGVFGYPYDEAATVAISVIKEFHNEFKEVHFVLFLEDIYQVWVNKANDLMKN 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc31305g00002 201 ProSiteProfiles Macro domain profile. 14 199 IPR002589 -
Stsc31305g00002 201 SMART YBR022w_8 26 164 IPR002589 -
Stsc31305g00002 201 Pfam Macro domain 47 164 IPR002589 -
Stsc31305g00002 201 Gene3D Leucine Aminopeptidase, subunit E, domain 1 7 201 IPR043472 -
Stsc31305g00002 201 SUPERFAMILY Macro domain-like 16 194 IPR043472 -
Stsc31305g00002 201 PANTHER GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED 26 197 - -
Stsc31305g00002 201 CDD Macro_OAADPr_deacetylase 27 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc31305g00002 Stsc-Chr31305 11027 13144 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc31305g00002 32 137 C2H2 Transcription Factor Family AT5G01310 33.613 2.42e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc31305g00002 K23518 - qsa:O6P43_020114 330.102