Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc312g00007 ATGGAAGATACGTCGGGTGCGGCTGGTTCTTCAACAGCAATAAACTCTTCCAATATAGGATTTCAGTTATTGAAGAAGCATGGTTGGAAAGAAGGCACTGGTCTTGGAGTTTCTGAGCAGGGTAGATTAGAGCCTGTAGAAACATACGTGAAGAATAATAAACGAGGTTTGGGAGCAGATAAATCAAAGAACAAGGCTGTCAAACCTGCTCATACTGATGATGGCTCTGAGGAAAACAATAAGCAGGAATCTAAGAAGAAAAAGAAGGCACTTTCTAAACGGATTAGAAAGATGGAGGAGCTTGAAAAGAAGATGCAAGAGAAGGAATTTGAGCGTGCTTTCTTCAGGGAGTTCTGGCCAGAAAATGTATAA 372 0.4113 MEDTSGAAGSSTAINSSNIGFQLLKKHGWKEGTGLGVSEQGRLEPVETYVKNNKRGLGADKSKNKAVKPAHTDDGSEENNKQESKKKKKALSKRIRKMEELEKKMQEKEFERAFFREFWPENV 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc312g00007 123 ProSiteProfiles G-patch domain profile. 16 62 IPR000467 GO:0003676
Stsc312g00007 123 MobiDBLite consensus disorder prediction 31 93 - -
Stsc312g00007 123 Coils Coil 81 111 - -
Stsc312g00007 123 SMART G-patch_5 14 60 IPR000467 GO:0003676
Stsc312g00007 123 MobiDBLite consensus disorder prediction 54 85 - -
Stsc312g00007 123 Pfam G-patch domain 17 59 IPR000467 GO:0003676
Stsc312g00007 123 PANTHER BAT4 PROTEIN-RELATED 7 123 IPR039146 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc312g00007 Stsc-Chr312 25601 27855 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc312g00007 1 58 C2H2 Transcription Factor Family AT5G26610 46.552 2.03e-10 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc312g00007 - - cam:101497292 163.696