Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc31296g00003 ATGGAGAAGGAAGAAAAGAATCGAGTGATTGATCACTTGGCAAAGCACATAGCACCTGGTGCTGTTCTTATGCTGAGGAGTGCTCATGGTGCTGTGTTTTTCTGTACCCTGTTGTTGAACCCTGTGATCTTAGAAGCTTTGAGGTTCTCTTTGTGTTCCACCCTTCTGATGAGGTTATCAATTCTGTTATCATGCCTCGTAAATACCCCCTTTCTATGGTTGAACAAGAACAAGGACTTACTTCTTCTATCATATTACCAAATAAGTGTTCTGATAAGATTCAAGTCTTCAATGCCCTCTCAATCATGGCAACATCATCATTGA 324 0.4074 MEKEEKNRVIDHLAKHIAPGAVLMLRSAHGAVFFCTLLLNPVILEALRFSLCSTLLMRLSILLSCLVNTPFLWLNKNKDLLLLSYYQISVLIRFKSSMPSQSWQHHH 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc31296g00003 107 Pfam Nicotianamine synthase protein 1 41 IPR004298 GO:0030410|GO:0030418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc31296g00003 Stsc-Chr31296 16835 17641 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc31296g00003 1 48 Nicotianamine Synthase Gene Family AT1G09240 56.250 1.51e-11 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc31296g00003 K05953 - qsa:O6P43_007426 60.8474