Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc31287g00002 ATGGCTGCTTCAACAATGGCTCTCTCTTCTCCATCATTGGCTGGCCAAGCAATCAAGCTTTCACCCTCCAACCCTGAGCTTGGCGTTGGAAGAGTCTCCATGAGGAAAGCAACCACCAAGCAAGTTTCCTCTGGAAGCCCATGGTACGGCCCAGACCGTGTCAAGTACTTGGGCCCATTCTCTGGTGAGGCCCCATCCTACCTCACTGGTGAGTTCCCTGGTGACTATGGATGGGACACTGCTGGGCTTTCTGCTGACCCAGAGACATTTGCCAGGAACCGTGAGCTTGAAGTAATCCACTGCAGGTGGGCCATGCTTGGGGCCCTGGGCTGTGTCTTCCCTGAGCTCTTGGCCCGCAATGGTGTCAAATTCGGTGAGGCTGTGTGGTTCAAGGCCGGGTCTCAGATATTTAGTGAAGGCGGGCTTGACTACTTGGGCAACCCAAGCCTGATCCATGCTCAGAGCATTCTTGCCATTTGGGCCACCCAGGTCATCTTGATGGGCGCAGTTGAGGGCTACCAGGCTTTTGCTGAGCTGAAGGTGAAGGAGATCAAGAATGGCAGGCTTGCCATGTTCTCCATGTTTGGGTTCTTTGTTCAGGCCATTGTGACTGGAAAGGGCCCAATTGAGAATCTTGCTGACCACCTTGCTGACCCAGTCAACAATAATGCTTGGGCCTATGCCACAAACTTTGTTCCTGGAAAGTGA 708 0.5353 MAASTMALSSPSLAGQAIKLSPSNPELGVGRVSMRKATTKQVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYQAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVPGK 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc31287g00002 235 Gene3D Chlorophyll a/b binding protein domain 175 228 - -
Stsc31287g00002 235 Gene3D Chlorophyll a/b binding protein domain 55 174 - -
Stsc31287g00002 235 FunFam Chlorophyll a-b binding protein, chloroplastic 55 147 - -
Stsc31287g00002 235 Pfam Chlorophyll A-B binding protein 175 201 IPR022796 -
Stsc31287g00002 235 Pfam Chlorophyll A-B binding protein 64 173 IPR022796 -
Stsc31287g00002 235 SUPERFAMILY Chlorophyll a-b binding protein 47 232 - -
Stsc31287g00002 235 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 174 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc31287g00002 Stsc-Chr31287 3490 4301 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc31287g00002 1 235 Chloroplast and Mitochondria Gene Families AT2G34430 78.571 8.24e-150 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc31287g00002 K08912 - qsu:112030611 444.121