Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc31287g00001 ATGGCTGCTTCAACAATGGCACTCTCTTCTCCATCATTGGCTGGCCAAGCAATCAAGCTTTCACCCTCCAACCCAGAGCTTGGTGTTGGAAGAGTCTCCATGAGGAAAGCAACCACCAAGCAAGTTTCCTCTGGAAGCCCATGGTACGGCCCAGACCGTGTCAAGTACTTGGGCCCATTCTCTGGTGAGGCCCCATCCTACCTCACTGGTGAGTTCCCTGGTGACTATGGATGGGACACTGCTGGGCTTTCTGCTGACCCAGAGACATTTGCCAGGAACCGTGAGCTTGAAGTAATCCACTGCAGGTGGGCCATGCTTGGGGCCCTGGGCTGTGTCTTCCCTGAGCTCTTGGCCCGCAATGGTGTTAAATTTGGTGAGGCTGTGTGGTTCAAGGCCGGGTCTCAGATATTTAGCGAGGGTGGGCTTGACTACTTGGGCAACCCAAGCCTGATCCATGCTCAGAGCATTCTTGCCATTTGGGCCACCCAGGTCATCTTGATGGGCGCAGTTGAGGGCTACCGTATTGCTGGTGGGCCTCTTGGTGAGGTGACTGACCCACTATACCCAGGTGGAAGCTTTGACCCATTGGGCCTAGCTGATGACCCAGAGGCTTTTGCTGAGCTGAAGGTGAAGGAGATCAAGAATGGCAGGCTTGCCATGTTCTCCATGTTTGGGTTCTTTGTTCAGGCCATTGTGACTGGAAAGGGCCCAATTGAGAATCTTGCTGACCACCTTGCTGACCCAGTCAACAACAATGCTTGGGCTTATGCCACAAACTTTGTCCCCGGAAAGTGA 795 0.5384 MAASTMALSSPSLAGQAIKLSPSNPELGVGRVSMRKATTKQVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVPGK 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc31287g00001 264 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 264 IPR001344 GO:0009765|GO:0016020
Stsc31287g00001 264 SUPERFAMILY Chlorophyll a-b binding protein 47 261 - -
Stsc31287g00001 264 Gene3D Chlorophyll a/b binding protein domain 55 257 - -
Stsc31287g00001 264 Pfam Chlorophyll A-B binding protein 64 230 IPR022796 -
Stsc31287g00001 264 FunFam Chlorophyll a-b binding protein, chloroplastic 55 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc31287g00001 Stsc-Chr31287 769 1563 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc31287g00001 1 264 Chloroplast and Mitochondria Gene Families AT1G29930 88.764 1.66e-172 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc31287g00001 K08912 - qsu:112030611 521.931