Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc31278g00002 ATGAATACCAGAACCGAAAAGGGCGAGGTAGTGAAAATGGCAGGCGGAGCAGGAATGATACTGCTCGTGAATCAAGGAGAAGAGCTTTTTGCTGACTCTCACGTTTTACCAGCAACTTCCTTAGGTGCCTCAGCAAGCAATGCAATTCGAAACTACATCCACTCTTCCAAATCTCCAACAGCTTCAATTTCATTCATAGGAACAATGTATGGTGACCCTGCACCAGTTATGGCAGCATTTTCTTCTAGAGGGCCAAGTATAGTGGGGCCAGATGTGATTAAGCCAGATGTGACTGCACCTGGTGTGAACATCTTGGCTTCTTGGCCACCATTAACTGGTCCAAGCATGCTCAAGAGCGACAAAAGGAGTGTGCTATTTAACATAGTCTCGGGCACCTCGATGTCTTGCCCCCACGTTACCGGCATAGCAGCACTTCTCAAATCAGTGCACAAAGATTGGTCACCAGCAGCTATCAAATCTGCACTGATGACCACAGCTTACACAGTTAACAACAGAGGTTCTCCTCTCTTAGACATTGGATCAAACACCTCATCTGCATTCGCTAACCCTTTTGCATTTGGTTCAGGCCATGTCAACCCAGAACGTGCCTCTAATCCAGGGTTAGTCTATGATATCACCAACAAAGATTACCTAAACTACTTGTGCAGCCTTAACTATACTCCTACCCAAATTGCTATAATCTCAAAGGGTCATTTCAAATGCTCCAAAGATACAAAATTTCAACTTGGTGACCTAAACTACCCTTCATTTTCTGTCTCATTTGACATAAATAGCAGAAATTCTAGTGTTACATACAAAAGGGTAGTCACAAATGTTGGATATCCTAGTAGTACTTATACAGTGAAAGTTGAAGAACCAAATGGAGTATCAGTTAAGGTTGAACCAAGGACATTAAGGTTTGGAAAAATAGGAGAGAAATTGAAATATAGTGTGACTTTTGTTGCACATGGAGGAACAACAATAAGTGACACTTCAACATTTGGATCATTGACTTGGGTGTCAAATAAGTACAATGTTAGAAGCCCTATAGCAATAACCTGGCAATAG 1068 0.4204 MNTRTEKGEVVKMAGGAGMILLVNQGEELFADSHVLPATSLGASASNAIRNYIHSSKSPTASISFIGTMYGDPAPVMAAFSSRGPSIVGPDVIKPDVTAPGVNILASWPPLTGPSMLKSDKRSVLFNIVSGTSMSCPHVTGIAALLKSVHKDWSPAAIKSALMTTAYTVNNRGSPLLDIGSNTSSAFANPFAFGSGHVNPERASNPGLVYDITNKDYLNYLCSLNYTPTQIAIISKGHFKCSKDTKFQLGDLNYPSFSVSFDINSRNSSVTYKRVVTNVGYPSSTYTVKVEEPNGVSVKVEPRTLRFGKIGEKLKYSVTFVAHGGTTISDTSTFGSLTWVSNKYNVRSPIAITWQ 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc31278g00002 355 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 4 351 IPR045051 -
Stsc31278g00002 355 Pfam Fibronectin type-III domain 251 352 IPR041469 -
Stsc31278g00002 355 SUPERFAMILY Subtilisin-like 53 208 IPR036852 GO:0004252|GO:0006508
Stsc31278g00002 355 ProSiteProfiles Serine proteases, subtilase domain profile. 1 204 - -
Stsc31278g00002 355 Gene3D - 221 354 - -
Stsc31278g00002 355 Gene3D Peptidase S8/S53 domain 71 217 IPR036852 GO:0004252|GO:0006508
Stsc31278g00002 355 ProSitePatterns Serine proteases, subtilase family, serine active site. 131 141 IPR023828 -
Stsc31278g00002 355 Gene3D - 7 70 - -
Stsc31278g00002 355 Pfam Subtilase family 43 171 IPR000209 GO:0006508|GO:0008236
Stsc31278g00002 355 CDD PA_subtilisin_like 4 63 - -
Stsc31278g00002 355 FunFam Subtilisin-like protease SBT1.5 221 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc31278g00002 Stsc-Chr31278 6864 8956 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc31278g00002 4 355 Subtilisin-like Serine Gene Family AT1G01900 54.930 3.77e-126 378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc31278g00002 - - aip:107626028 622.854